Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neolamprologus_20brichardi_20[refseq_20GCF_5F000239395.1_202011-12- 22] 9,099 sequences; 847,910,432 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq36 123 2e-23 >seq36 Length=5414369 Score = 123 bits (136), Expect = 2e-23 Identities = 133/175 (76%), Gaps = 1/175 (1%) Strand=Plus/Plus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 |||||| ||||||||||| || || | |||||||||||| || ||||| ||||||||||| Sbjct 2792885 CATGTCTGTGTACTCTGCACCAAAGTGCCTCCACTGGAAACCATACACAGGTCCTAGGTC 2792944 Query 25833 TCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTC 25892 || || || |||| || || || |||| ||||| | || || ||||| || Sbjct 2792945 ACCCTCCTCTCTGTCAGTGAACCCAAGGTTGTCCAGGAAGTCCCGAGACCCGTTGGCATC 2793004 Query 25893 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGAC 25946 ||||||||| || || || || || ||||| ||||| ||||| || |||| |||| Sbjct 2793005 CCAGATCTTCACTCCTTTTTCTGACAGCTCCTTGGAATTTGTTGATCCCTGTGAC 2793059 Score = 91.5 bits (100), Expect = 1e-13 Identities = 102/135 (76%), Gaps = 1/135 (1%) Strand=Plus/Plus Query 25491 AGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGT 25550 || || |||| || || |||||||| || || || | |||||||||||||| || || Sbjct 2792073 AGTCCTGTAATGTGTGCAATCATGTAGGTAAGAAGTGAATAGCTGGCGATGTTGAAAGGC 2792132 Query 25551 ACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCT 25610 ||||| || ||||| | | | || | |||||| ||||||||||| ||||| | || | Sbjct 2792133 ACCCCTAATCCCATAT-CAGCTGAGCGCTGGTACAGCTGACACGACAGCTCGCCATCACA 2792191 Query 25611 CACGTAAAACTGACA 25625 |||||| ||||| || Sbjct 2792192 CACGTAGAACTGGCA 2792206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340099880759727