Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neolamprologus_20brichardi_20[refseq_20GCF_5F000239395.1_202011-12- 22] 9,099 sequences; 847,910,432 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq38 86.0 2e-11 seq89 84.2 6e-11 >seq38 Length=4945250 Score = 86.0 bits (94), Expect = 2e-11 Identities = 121/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 364969 CCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATT 365028 ||||| |||||||||| | ||||||||||||||||| || || | |||| | | Sbjct 1348577 CCAGATGATCTGAAGCAGCTCTACAAAACCGTATGGGAGATCTCACAGAAAACTGTAGTC 1348636 Query 365029 GATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATG 365088 | ||||| ||||| || || || | ||| ||||||||||| | ||| | ||| Sbjct 1348637 AAGATGGCCGCCGACCGTGGGGCCTACATCGACCAGAGCCAGTCCCTGAACATCCACATA 1348696 Query 365089 ACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAA 365138 | |||| | || || |||||| || |||||| |||||||| ||||| Sbjct 1348697 GCAGAGCCGAACTACGGCAAGCTGACCAGCATGCACTTCTACGGCTGGAA 1348746 >seq89 Length=2585884 Score = 84.2 bits (92), Expect = 6e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 363838 GGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTC 363897 |||||||| |||||||| |||||||| ||| | ||| | ||||||||| | ||| | Sbjct 778090 GGGGCGTTCGCTATGTACCTCGAGCCGTGGCATTCTGATGTGTTTGAGTTTTTGGAGTTG 778031 Query 363898 CGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTT 363957 ||| |||||||| ||||| || | | || || || ||||| | || | ||| | Sbjct 778030 AAGAAGAACACGGGTAAAGAAGAGCAGAGGGCGCGGGACCTGTTTTTCGCCTTGTGGATC 777971 Query 363958 TCTGACCATTTTATGAAGCGCGTGGA 363983 | || | |||||||||||| ||||| Sbjct 777970 CCAGATCTTTTTATGAAGCGAGTGGA 777945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303201653815418