Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neolamprologus_20brichardi_20[refseq_20GCF_5F000239395.1_202011-12- 22] 9,099 sequences; 847,910,432 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq65 104 3e-17 seq220 102 9e-17 seq88 93.3 5e-14 seq28 91.5 2e-13 seq15 89.7 6e-13 seq8 89.7 6e-13 seq26 87.8 2e-12 >seq65 Length=3759856 Score = 104 bits (114), Expect = 3e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || | ||| || || | || || |||||||| ||||| || Sbjct 3001545 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCATCTTCCAGCTGCTTGCCAGCAAA 3001486 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || | ||||||||||| || | || ||||| ||| |||||| |||| | Sbjct 3001485 GATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCCTGGATTTTGGCCTTGACATT 3001426 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||| || | || || |||| |||||||| || || ||||| || || || Sbjct 3001425 CTCAATGGTGTCACTGGGCTCAACCTCGAGAGTGATGGTCTTACCAGTTAGGGTTTTCAC 3001366 Query 42197 AAAGATTTGCATTTT 42211 |||||| ||||| || Sbjct 3001365 AAAGATCTGCATGTT 3001351 >seq220 Length=664275 Score = 102 bits (112), Expect = 9e-17 Identities = 71/81 (88%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||| ||||||||| || | | |||||||||| ||||||||||||||||||||| |||| Sbjct 408178 AAAGATTTTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 408237 Query 57058 TCACCACTATACTACCGAGGA 57078 |||||||||||||| |||||| Sbjct 408238 TCACCACTATACTAACGAGGA 408258 >seq88 Length=2595556 Score = 93.3 bits (102), Expect = 5e-14 Identities = 68/79 (86%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 57000 AAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTC 57059 |||||| |||| || | | |||||||||| ||||||||||||||||||||| ||||| Sbjct 2411982 AAATTTACTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTA 2412041 Query 57060 ACCACTATACTACCGAGGA 57078 |||||||||||| |||||| Sbjct 2412042 ACCACTATACTAACGAGGA 2412060 >seq28 Length=6265338 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | |||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 1968420 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 1968361 Query 57066 ATACTACCGAGGA 57078 |||||| |||||| Sbjct 1968360 ATACTAACGAGGA 1968348 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 1965653 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1965594 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 1965593 TACTAACGAGGA 1965582 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 1966572 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1966513 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 1966512 TACTAACGAGGA 1966501 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 1969043 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1968984 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 1968983 TACTAACGAGGA 1968972 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 1969521 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1969462 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 1969461 TACTAACGAGGA 1969450 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 1971762 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1971703 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 1971702 TACTAACGAGGA 1971691 >seq15 Length=10076045 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 4172803 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 4172744 Query 57067 TACTACCGAGGATT 57080 ||||| |||||||| Sbjct 4172743 TACTAACGAGGATT 4172730 >seq8 Length=13932129 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 851416 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 851475 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 851476 TACTAACGAGGA 851487 >seq26 Length=6558494 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 |||||| |||| || | | |||||||||| ||||||||||||||||||||| |||| Sbjct 1255614 AAAAATACACTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 1255673 Query 57058 TCACCACTATACTACCGAGGA 57078 | |||||||||||| |||||| Sbjct 1255674 TAACCACTATACTAACGAGGA 1255694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543151016334160