Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neolamprologus_20brichardi_20[refseq_20GCF_5F000239395.1_202011-12- 22] 9,099 sequences; 847,910,432 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq38 158 1e-33 seq65 91.5 1e-13 seq89 84.2 2e-11 >seq38 Length=4945250 Score = 158 bits (174), Expect = 1e-33 Identities = 927/1473 (63%), Gaps = 48/1473 (3%) Strand=Plus/Minus Query 153009 AGGTCATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAA 153068 ||||| | || || || ||||||| | |||||||| |||| | ||| || | Sbjct 1347726 AGGTCTTTGAGCAGGTGGGGGTTGACGATCTGAAACTCCCCCGAGAGCACCCGGCGGGTG 1347667 Query 153069 TATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTT 153128 || | ||||| ||| | | || | ||| ||||| ||||| || || || || |||| Sbjct 1347666 TAGATGTTGCTTGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAG 1347607 Query 153129 GCGGTCGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCC 153188 || || ||||| | || || || |||| || ||| || || | ||| Sbjct 1347606 GCCGTGGGCATCGGGGACAGCAGCAGGCTGTTCCTCACGCCATGTTTGGCGATCTTCTCC 1347547 Query 153189 TTCAACGCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAAC 153248 |||| | || ||| |||||||| ||| || ||| | ||||||||||||||| | Sbjct 1347546 TTCAGCAGCTTCCAGTCCCACAGGTCCGTTGGCGTCTTCTCCCACATGTCGTACTGGAGA 1347487 Query 153249 ACTCCTCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTG-GGCCAG 153307 | || ||| | || ||| | |||| ||| ||||| || | |||||| Sbjct 1347486 ATGCCCTTACTCACCGGCGAGCCTTCGTACGTCTCATAGGTGCCGA-GCTCGGCGGCCAG 1347428 Query 153308 TTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAAC 153367 |||||||| || || | ||| |||| || || || || ||| || | ||||| | Sbjct 1347427 CTCGCAGCTCGCTTCCAAAGCGGCATAATACATTGTCTCAAAGATCTGGATGTTGAGCAG 1347368 Query 153368 GGCCGCTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTG 153427 || || ||| || | || |||| || | ||||| || |||| ||||| Sbjct 1347367 TTGAGCCTCGGGGCTTTCAAAGGGATAACGCATAAGGATGAAGGCATCAGCCAATCCCTG 1347308 Query 153428 GATACCGACGCCGATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATA 153487 || |||| || || || | || | ||| | ||| || | | || || Sbjct 1347307 GACCCCGATTCCTATCGGCCTGTGGCGCATGTTCGACCTCCTGGCTTCTTCCACCGGGTA 1347248 Query 153488 GTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAG 153547 || ||| ||||||| ||||| | ||| | || | ||||| || | | | Sbjct 1347247 GTAGTTGATGTCGATAACCTTGTTCAAGTTCCTGACAATTACTTTGGTCACGGATGCCAA 1347188 Query 153548 TTTCTCGAAATCATAGGTCATTTCGTCGACG-CGTACGCATCGATTCACGGCAATAGACG 153606 ||| | || ||||| ||| || | | ||||| || || | || | ||| | Sbjct 1347187 TTTTTTAAAGTCATAAGTCCGCTCAGGGGTGACGTAC--ATG--TTGAGAGCGACAGAGG 1347132 Query 153607 CCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGT 153666 ||||||| || || ||| ||| || | |||||| ||||| || | ||| |||| Sbjct 1347131 CCAGATTGCAAACCGCCACCTCGTCCTTGCTAGTGTACTCGACGATTTCCGTGCAAAGGT 1347072 Query 153667 TGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGA 153726 ||||||| || ||| ||||| ||| ||||| ||||| || | ||||| || |||||| Sbjct 1347071 TGCTGCACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCATCTTTGT 1347012 Query 153727 AGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT---AAACCTATGCAGGT 153783 ||| ||||||||| ||||| || |||| |||| ||| | ||| || || | Sbjct 1347011 AGACCATGTACGGCGTCCCGGTTTCTGTCTGCGACTCGATGATTGCATACC-AT--AGCT 1346955 Query 153784 CCTGCGC--TC-GCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTC 153840 ||| || || ||| |||| | | ||||| ||||| |||| ||| ||| Sbjct 1346954 GCTGAGCCTTCACCACACGCTTC---ACCCTCCCCTCCCTCTCATATCTGGTGTAGAGTT 1346898 Query 153841 GCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCG 153900 |||||||| || || |||| || | || ||||| || | |||||||||||| | Sbjct 1346897 CTTCAAACTCCTCCCCCCAGCACTCATCCAGCCCGGGGCAGTCGGCCGGACACATCAGGG 1346838 Query 153901 ACCACATATCGTCGGCGTTG------ACGCGTCGCATGAACAGATCCGGCACCCAGAGCG 153954 |||| ||| | |||| || || |||||| || || || | ||| || | Sbjct 1346837 ACCA------GTCTGTGTTGTTCTCCACCCGCTTCATGAAGAGGTCAGGGATCCACAGGG 1346784 Query 153955 CGTACATGAGGTCGC--GCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGATTGAG 154012 |||| | | ||| | || | ||| |||||| ||| |||| ||||| | || Sbjct 1346783 CGTAGAACAAGTCCCTGGCTCGCTGC--TCCTCCTTTCCCGTGTTCTTCTTCAGCTCCAG 1346726 Query 154013 CACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACC---TTTACG 154069 | | | | ||| ||||||||| || | ||| | ||| | ||| || | | Sbjct 1346725 AAAGTCGAACACATCGAAGTGCCAGGGCTCCAGGTACATGGCGAAGGCGCCGGGTCTTTT 1346666 Query 154070 CTTTCCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAG 154129 || || |||||||| || | ||| | | |||||| | || | || ||| || | || Sbjct 1346665 GTTGCCCCCCTGATCAACATAACGCGCTGTGTTGTTGTAAACCCTCAACATTGGGACGAG 1346606 Query 154130 GCCGCTTGCGGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCAC 154189 ||| | | ||||||||| ||| | ||| || || | | | ||||| Sbjct 1346605 CCCGTTGGAACAGCCGTTGGTGCCGGCGATGTAGCTCCC-----CGTGGATCTAATGCAG 1346551 Query 154190 GTTA-----ACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTC 154244 | | |||||||| || ||| | | || || ||| ||||| | |||||| Sbjct 1346550 CTGACTGCCACGCCAATCCCTCCGGCTGATTTGGAGATGAGGGCGCAATGCTTCAGCGTG 1346491 Query 154245 CTGTAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGC 154304 |||||| || |||||||| || || | | |||||| ||| || ||| ||| Sbjct 1346490 TCGTAGATCCCCTCGATGCTGTCATCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGC 1346431 Query 154305 GGAATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTC 154364 || || ||||| || |||||||| || ||||| || ||| || | | Sbjct 1346430 GGCCTGTTGGTTCCAGCATTGAAGAGGGTCGGGGAGGCGTGGGTGAACCACTTCTCTGAC 1346371 Query 154365 ATCATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACG 154424 | || | ||| || |||||||| | || |||||| || || || || | || || Sbjct 1346370 AGCAGGTTGTAGGTCTCGATGGCTTTTTTGATATCTGTCCCATGGATTCCCACAGCCACC 1346311 Query 154425 CGCATGAGCATGTGCTGCGGACGTTCGGCGACT 154457 | ||||||||||||||||||||| || || ||| Sbjct 1346310 CTCATGAGCATGTGCTGCGGACGCTCAGCTACT 1346278 >seq65 Length=3759856 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| || || || || || || || || || | | Sbjct 3001547 GACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCATCTTCCAGCTGCTTGCCAGCA 3001488 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | ||| ||||| || || || ||||| || || |||||| || | Sbjct 3001487 AAGATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCCTGGATTTTGGCCTTGACA 3001428 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | | ||| ||||||| || | || |||||||| || ||||| Sbjct 3001427 TTCTCAATGGTGTCACTGGGCTCAACCTCGAGAGTGATGGTCTTACCAGTTAGGGTTTTC 3001368 Query 138601 ACAAAAATCTGCATG 138615 ||||| ||||||||| Sbjct 3001367 ACAAAGATCTGCATG 3001353 >seq89 Length=2585884 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 153640 TGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGAT 153699 |||||| |||||||| | ||| || |||||| |||| ||| ||||| ||||||||||| Sbjct 777466 TGTACTCTACGATCTCTGTGCACAGATTGCTGGATTTGATGGTGCCCAGATTTTGCTGAT 777525 Query 153700 TGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGT 153740 | || || | |||||| || || ||| | | |||||| ||| Sbjct 777526 TACTCTTTCTATTGCAGGCATCCTTGTAAACCATGTATGGT 777566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496205956355280