Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neolamprologus_20brichardi_20[refseq_20GCF_5F000239395.1_202011-12- 22] 9,099 sequences; 847,910,432 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq9 251 5e-61 seq81 96.9 3e-14 >seq9 Length=13701132 Score = 251 bits (278), Expect = 5e-61 Identities = 889/1376 (65%), Gaps = 12/1376 (1%) Strand=Plus/Minus Query 517265 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 517324 ||||| ||||| || |||||||| | |||||||| || || || || || || |||| Sbjct 9628110 ACATTTAGAATGCCGTTGGCATCGATGTCAAATGTTACGTCTATCTGTGGAACACCTCGG 9628051 Query 517325 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 517384 |||| || ||||| ||| | | |||| | |||||| || || | ||| || | Sbjct 9628050 GGAGCTGGAGGGATACCTGTGAGGTCAAATTTGCCCAGAAGGTTGTTGTATTTGGTCATG 9627991 Query 517385 TTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTA 517444 || || || || || | || || || | | || |||||||| || || | Sbjct 9627990 GCTCTCTCGCCTTCAAATACCTGAATCAATACACCTGGCTGGTTATCTGAGTATGTGGAG 9627931 Query 517445 AATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAAT 517503 || | |||| | | || || ||||| ||||||| | || | | ||||||| Sbjct 9627930 AAGA-TCTGAGTCTGCTTTGTGGGGATTGTGGTGTTTCGCTTTATCAGAGGTGTCATAAC 9627872 Query 517504 ACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTG 517563 ||| ||||| ||||| | || ||||| || |||| |||||| | || | | || ||| Sbjct 9627871 ACCGCCTGCGGTTTCAATGCCCAGAGACAGGGGAGCGACATCCAGCAGCAGCAGATCTTG 9627812 Query 517564 AAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAAC 517623 | || || || | || | || || |||||||| | || ||||| || || || Sbjct 9627811 GACATTCTCTGAGGTGTCGCCCATGAGGATGGCTGCTTGTACTGCTGCACCGTAGGCTAC 9627752 Query 517624 AGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT-TGAAAGAA 517682 ||||||||| || |||| | | || || | ||| ||||| || || | || |||| Sbjct 9627751 AGCTTCATCTGGGTTAATGCTCTTGTTCAGGTCTTTGCCATTAAAGAAGTCCTGTAAGAG 9627692 Query 517683 GTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCA-CCTGT 517741 || | | || ||||| | | || || || || | ||||||||||| | |||| Sbjct 9627691 CTTCTGG-ATTTTGGGAATTCTTGTGGAGCCACCGACCAGGACAATTTCATGAATCCTG- 9627634 Query 517742 GATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAAC 517801 ||||||||||| || | |||| | |||| || || || |||| | || || Sbjct 9627633 GATTTATCCAGCTTGGCATCCTGCAGGGCTTTCTCGACTGGGCCAAGTGTTCCCCTGAAA 9627574 Query 517802 AAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCT 517861 | ||||| || || || || || || || | | | | | |||||||||| Sbjct 9627573 AGATCTGAGTTGAGCTCCTCAAAACGTGCCCTTGTGATGGAGGTGTAAAAATCAATTCCC 9627514 Query 517862 TCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCA 517921 || || | ||| || | ||||| | | ||||| || |||| | | || || Sbjct 9627513 TCAAAGAGAGAGTCGATCTCAATGCTTGCCTGAGTGCTGGAGGATAAGGTCCTCTTTGCC 9627454 Query 517922 CGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCTGTTT-- 517979 | || || ||||| | | ||| | | ||| | || ||| | ||| | || Sbjct 9627453 CTCTCGCAAGCTGTACGCAATCTCCTCACTGCTCT--CTTATTCTGGCTAATGTCCTTCT 9627396 Query 517980 TATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCAC 518039 | | |||||| || || || || ||| | | || | | || ||||| || || | Sbjct 9627395 TGTGTTTTCTTTTAAATTCCTCTACAAAGTGCTTGACCATTTGGTTGTCAAAGTCCTCCC 9627336 Query 518040 CTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACA 518099 | || | | || | |||||| || ||| | || | || | ||| |||||| | || Sbjct 9627335 CACCAAGGTGTGTGTCTCCTGAAGTGGCTTTGACCTCAAAGATGCCAGCTTCAATGGTCA 9627276 Query 518100 AAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTT-TG 518158 || || |||||| ||| || || || | |||||| || || ||||| |||| || Sbjct 9627275 GAATAGACACATCAAAGGTGCCTCCGCCAAGATCAAAGATCAGCACATTGCGTTCTCCTG 9627216 Query 518159 TCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTC 518218 | ||| ||| ||| || ||||| |||| || || || || || |||||||| || ||| Sbjct 9627215 TTTTGCCTTT-ATCCAGGCCATATGCAATGGCTGCTGCTGTGGGCTCATTAATGATCCTC 9627157 Query 518219 AAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTA 518278 | |||||| || |||| || || ||||| || || |||||||| ||||| ||||| Sbjct 9627156 AGAACATTTAGTCCAGAGATCACCCCAGCATCCTTCGTAGCTTGTCTCTGTGAGTCGTTG 9627097 Query 518279 AAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCC 518338 ||||| || || || || || || || | | || || || | || || || Sbjct 9627096 AAATAAGCTGGCACTGTGATGACTGCGTTTGACACCCTTTGTCCCAGGTAGGCCTCAGCT 9627037 Query 518339 GTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGAT 518398 | | ||||||||| | | ||| || ||||||| || || | || ||||| Sbjct 9627036 ATCTCCTTCATTTTAACCAGGACCATGGAGGAAATTTCCTCAGGATAGAATGCCTTGGTC 9626977 Query 518399 TCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGC 518458 || || ||| || | | | || || | | | | ||| || || || ||| Sbjct 9626976 TCCCCTTTGTATTCCACCTGGACTTTGGGCTTTCCATTATCGTCAATCACCTTGAAAGGC 9626917 Query 518459 CAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTT 518518 ||| ||||| || || || || | |||||||||| | ||| ||||| | ||||| Sbjct 9626916 CAGAGCTTCATGTCGGACTGTACGACTGGGTCATTAAACTTTCTTCCAATCAGCCGTTTG 9626857 Query 518519 GCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATC 518578 |||||||| || || || | || || |||||| |||| | ||||| ||||||||||| Sbjct 9626856 GCATCAAAGATTGTGTTATTGGGGTTCATTGCAACTTGGTTCTTGGCAGCATCTCCAATA 9626797 Query 518579 AGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATC 518634 || |||||| || ||||| | ||||| |||||| || | ||| || ||||| Sbjct 9626796 AGCCTTTCTGTGTCGGTAAAAGCCACATAGCTTGGAGTGGTTCTATTGCCCTGATC 9626741 >seq81 Length=2813517 Score = 96.9 bits (106), Expect = 3e-14 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 ||||| || || ||||| |||| |||||||| || || ||||| || || | | ||| Sbjct 2420497 TTTTTGTCCAGGCCATAGGCAATGGCAGCAGCGGTGGGCTCATTGATGATACGAAGGACA 2420556 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 ||||| |||| ||| | ||||||||||| ||||| || | || || ||||| || || Sbjct 2420557 TTAAGCCCAGAAATGGTCCCTGCATCTTTGGTGGCCTGGCGCTGAGAGTCGTTGAAGTAG 2420616 Query 518285 GCAGGAACAGTAATAACGGCA 518305 ||||| ||||| | |||||| Sbjct 2420617 GCAGGCACAGTCACTACGGCA 2420637 Score = 87.8 bits (96), Expect = 1e-11 Identities = 131/185 (71%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 518526 AAATA--GTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATG 518583 ||||| || ||| |||| || | || |||| | ||||||||||| |||||||| Sbjct 2421130 AAATACTGTGTTGTTTGGGTTCAAGGCCACTTGGTTCTTGGCTGCATCCCCAATCAGCCT 2421189 Query 518584 TTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAAT 518643 || || || || |||| |||||| || || || | || || || ||||| ||||| Sbjct 2421190 CTCCGTGTCAGTGAATGCAACATAACTGGGTGTAGTCCTGTTTCCCTGGTCATTGGCAAT 2421249 Query 518644 AATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAAT 518703 |||||| ||||| |||| ||| | || |||||||| | || || || | ||||| Sbjct 2421250 AATTTCCACTTTGCCATGTTGAAAAACTCCTACACAGGAGTAGGTAGTGCCCAGGTCAAT 2421309 Query 518704 ACCAA 518708 ||||| Sbjct 2421310 ACCAA 2421314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780370877647894