Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neolamprologus_20brichardi_20[refseq_20GCF_5F000239395.1_202011-12- 22] 9,099 sequences; 847,910,432 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq29 84.2 3e-11 seq13 84.2 3e-11 >seq29 Length=6224470 Score = 84.2 bits (92), Expect = 3e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 102192 GCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTC 102251 || ||||| ||| ||||| ||||||||||| || || ||| ||| || | ||||| Sbjct 1440905 GCCTTTGCCGCTGTGGAGGGGATCTTCTTCTCGGGCTCGTTCGCCGCCATCTTCTGGCTG 1440964 Query 102252 AAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAG 102311 |||||| |||| || ||||| || || ||||||||||||||| ||| | |||||| Sbjct 1440965 AAGAAGAGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATCAGCAGAGACGAG 1441024 Query 102312 G 102312 | Sbjct 1441025 G 1441025 Score = 84.2 bits (92), Expect = 3e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 102192 GCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTC 102251 || ||||| ||| ||||| ||||||||||| || || ||| ||| || | ||||| Sbjct 1451522 GCCTTTGCCGCTGTGGAGGGGATCTTCTTCTCGGGCTCGTTCGCCGCCATCTTCTGGCTG 1451463 Query 102252 AAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAG 102311 |||||| |||| || ||||| || || ||||||||||||||| ||| | |||||| Sbjct 1451462 AAGAAGAGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATCAGCAGAGACGAG 1451403 Query 102312 G 102312 | Sbjct 1451402 G 1451402 >seq13 Length=10688992 Score = 84.2 bits (92), Expect = 3e-11 Identities = 85/108 (79%), Gaps = 2/108 (2%) Strand=Plus/Plus Query 102192 GCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCT 102250 || ||||| ||| || || ||||||||||||||||| || ||| ||||| || ||||| Sbjct 6295431 GCTTTTGCAGCTGTGGAAGGCATCTTCTTCTCTGGTTCATT-TGCTGCTATCTACTGGCT 6295489 Query 102251 CAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 102298 |||||| | || || ||||| || || ||| |||||||||||| || Sbjct 6295490 GAAGAAGAGGGGGCTAATGCCTGGCCTTAGCTACTCCAACGAGCTCAT 6295537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620671798311280