Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neolamprologus_20brichardi_20[refseq_20GCF_5F000239395.1_202011-12- 22] 9,099 sequences; 847,910,432 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq65 134 3e-26 seq92 125 2e-23 >seq65 Length=3759856 Score = 134 bits (148), Expect = 3e-26 Identities = 165/224 (74%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979 ||||| | || ||||||||||| |||||||| || || || ||||| |||| || || Sbjct 3001574 CTGAGACGCAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTG 3001515 Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 | |||||||| |||||||| || || ||||| || | || ||||| || ||||||||| Sbjct 3001514 CGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCT 3001455 Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCA 195096 || || || || ||||| |||||| |||||||||||||| ||| || || || Sbjct 3001454 TCCTTATCCTGGATTTTGGCCTTGACATTCTCAATGGTGTC---ACTGGGCTCAACCTCG 3001398 Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||||| || || | ||||| || || | ||||| Sbjct 3001397 AGAGTGATGGTCTTACCAGTTAGGGTTTTCACAAAGATCTGCAT 3001354 >seq92 Length=2575742 Score = 125 bits (138), Expect = 2e-23 Identities = 163/224 (73%), Gaps = 6/224 (3%) Strand=Plus/Plus Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979 ||||| | || ||||| || || |||||||| || || || ||||| || | || || Sbjct 2563978 CTGAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTG 2564037 Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 | |||||||| |||||||| || || ||||| || | || ||||| || ||||||||| Sbjct 2564038 CGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGTGGAATGCCT 2564097 Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCA 195096 || || || || ||||| ||||||||||||||||||||| ||| || || || Sbjct 2564098 TCCTTATCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCAACCTCC 2564154 Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | ||||| || || | || || || || | ||||| Sbjct 2564155 AGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 2564198 Score = 100 bits (110), Expect = 6e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 194941 AGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTA 195000 || |||||||| || || || ||||| || | || || | ||||||| |||||||| Sbjct 2563771 AGGGTGGACTCATTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTTCAGCTGCTTG 2563830 Query 195001 CCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGC 195060 || | ||||| || | || ||||| || ||||||||||| || || || ||||| | Sbjct 2563831 CCATCAAAGATCAGCCTCTGCTGGTCAGGTGGAATGCCTTCCTTATCCTGGATTTTAGCC 2563890 Query 195061 TTGACGTTCTCAATGGTGTC 195080 |||| ||||||||||||||| Sbjct 2563891 TTGATGTTCTCAATGGTGTC 2563910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109352255594933