Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neolamprologus_20brichardi_20[refseq_20GCF_5F000239395.1_202011-12- 22] 9,099 sequences; 847,910,432 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq65 113 4e-20 seq92 98.7 8e-16 >seq65 Length=3759856 Score = 113 bits (124), Expect = 4e-20 Identities = 149/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 |||||||| || || || || || ||||| |||| | || | |||| |||| ||| Sbjct 3001556 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCATCTTCCAGCTGC 3001497 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| |||| | ||| || ||||| ||||||||||| ||||| || ||||| Sbjct 3001496 TTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCCTGGATTTTG 3001437 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | |||||| | || || || ||||||| || || || ||| Sbjct 3001436 GCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGAGTGATGGTCTTACCAGTT 3001377 Query 101447 AAAGTTTTTACAAATATCTGCATGGTT 101473 | ||||| ||||| ||||||||| || Sbjct 3001376 AGGGTTTTCACAAAGATCTGCATGTTT 3001350 >seq92 Length=2575742 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || || || | ||| | || | ||| ||||| || || || || || ||||| || | | Sbjct 2563972 CCACCCCTGAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 2564031 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | |||| |||| ||||| || ||||| |||| | ||| || || || ||| Sbjct 2564032 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGTGGA 2564091 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| ||||| || ||||| || || | || | |||||| | || || Sbjct 2564092 ATGCCTTCCTTATCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACC 2564151 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGG 101471 || || |||| || ||||| || | || || ||||| |||||||||| Sbjct 2564152 TCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATGG 2564200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396234455078343