Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neolamprologus_20brichardi_20[refseq_20GCF_5F000239395.1_202011-12- 22] 9,099 sequences; 847,910,432 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq220 224 2e-52 seq8 224 2e-52 seq377 215 8e-50 seq2 190 3e-42 seq172 132 8e-25 seq11 127 3e-23 seq38 111 2e-18 seq29 93.3 7e-13 seq13 87.8 3e-11 >seq220 Length=664275 Score = 224 bits (248), Expect = 2e-52 Identities = 196/244 (80%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| ||||||||||| ||||| || ||||||||| ||||||| || ||| ||| Sbjct 458444 TGTACTTGGTCACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCACCGGGCA 458503 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || |||||||||||||||||||| | || | ||| ||| ||||||||| | Sbjct 458504 GCAGGAGCCGCACGGCGGTCTGGATCTCCCTGGAGGTGATGGTGGAGCGCTTGTTGTAGT 458563 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||||||| |||||| | | ||||||| |||| ||||||||||| |||||||||| Sbjct 458564 GAGCCAGGCGGGAGGCCTCAGAGGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 458623 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||| || |||||||||||||||||| |||||||||| Sbjct 458624 TGATGCTCATGGCCTTGGAGGAGATACCGGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 458683 Query 1485710 AAAC 1485713 |||| Sbjct 458684 AAAC 458687 >seq8 Length=13932129 Score = 224 bits (248), Expect = 2e-52 Identities = 196/244 (80%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| || |||||||| ||||| || ||||||||| ||||||| || ||| ||| Sbjct 13272225 TGTACTTGGTCACAGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCACCGGGCA 13272284 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||||||||||||||||||||||| | || | ||| ||| ||||||||| | Sbjct 13272285 GCAGGAGGCGCACGGCGGTCTGGATCTCCCTGGAGGTGATGGTGGAGCGCTTGTTGTAGT 13272344 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||||||| |||||| | | ||||||| |||| |||||||| || |||||||||| Sbjct 13272345 GAGCCAGGCGGGAGGCCTCAGAGGCGATGCGCTCGAAGATGTCGTTAACGAACGAGTTCA 13272404 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| |||||||||||||||||| |||||||||| Sbjct 13272405 TGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 13272464 Query 1485710 AAAC 1485713 |||| Sbjct 13272465 AAAC 13272468 Score = 219 bits (242), Expect = 7e-51 Identities = 195/244 (80%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| ||||||||||| ||||| || || |||||| ||||||| || ||| ||| Sbjct 13256766 TGTACTTGGTCACGGCCTTGGTGCCCTCGGACACAGCGTGCTTGGCCAGCTCACCGGGCA 13256825 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||||||||||||||||||||||| | || | ||| ||| ||||||||| | Sbjct 13256826 GCAGGAGGCGCACGGCGGTCTGGATCTCCCTGGAGGTGATGGTGGAGCGCTTGTTGTAGT 13256885 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||||||| |||||| | | ||||||| || | |||||||| ||||||||||||| Sbjct 13256886 GAGCCAGGCGGGAGGCCTCAGAGGCGATGCGCTCAAAGATGTCGTTAACAAACGAGTTCA 13256945 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||| || |||||||||||||||||| |||||||||| Sbjct 13256946 TGATGCTCATGGCCTTGGAGGAGATACCGGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 13257005 Query 1485710 AAAC 1485713 |||| Sbjct 13257006 AAAC 13257009 >seq377 Length=136998 Score = 215 bits (238), Expect = 8e-50 Identities = 194/244 (80%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| | | Sbjct 42180 TGTACTTGGTGACGGCCTTGGTGCCCTCAGACACGGCGTGCTTGGCCAGCTCACCGGGGA 42239 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || ||||||||| |||||||||||||| | || | ||| ||| ||| ||||| | Sbjct 42240 GGAGCAGGCGCACTGCGGTCTGGATCTCCCTGGAGGTGATGGTGGAGCGTTTGTTGTAGT 42299 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||| ||||| ||||||| ||||||| |||| |||||||||||||||||||||| Sbjct 42300 GCGCAAGGCGAGATGCCTCGGCAGCGATGCGCTCGAAGATGTCGTTGACAAACGAGTTCA 42359 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | |||| |||||| || ||||||||| |||||||| | |||||||| Sbjct 42360 TGATGCTCATGGCTTTGGAGGAGATCCCGGTGTCGGGGTGAACCTGCTTCAACACCTTGT 42419 Query 1485710 AAAC 1485713 | || Sbjct 42420 ACAC 42423 >seq2 Length=19631327 Score = 190 bits (210), Expect = 3e-42 Identities = 191/248 (77%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||||||||| || ||||| || ||||||||| ||||||| || ||| | | Sbjct 15842504 TGTACTTGGTGACGGCCTTTGTGCCCTCAGACACGGCGTGCTTGGCCAGCTCACCGGGGA 15842563 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || ||| || |||||||||||||| | || | ||| ||| ||||||||| | Sbjct 15842564 GAAGCAAGCGAACTGCGGTCTGGATCTCCCTGGAGGTGATGGTGGAGCGCTTGTTGTAGT 15842623 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||||||| ||| || | | |||| || |||| ||||||||||| |||||||||| Sbjct 15842624 GGGCCAGGCGGGAGGCTTCAGCGGCGATACGCTCGAAGATGTCGTTGACGAACGAGTTCA 15842683 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | || ||||| || ||||||||| |||||||| |||||||||| Sbjct 15842684 TGATGCTCATGGCCTTAGACGAGATACCGGTGTCGGGGTGAACCTGCTTCAGCACCTTGT 15842743 Query 1485710 AAACAAAG 1485717 | ||| || Sbjct 15842744 ACACATAG 15842751 >seq172 Length=1159537 Score = 132 bits (146), Expect = 8e-25 Identities = 127/163 (78%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| | | Sbjct 1137459 TGTACTTGGTGACGGCCTTGGTGCCCTCAGACACGGCGTGCTTGGCCAGCTCACCGGGGA 1137518 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||||||||| |||||||||||||| | || ||| ||| ||| ||||| | Sbjct 1137519 GCAGCAGGCGCACTGCGGTCTGGATCTCCCTGGACGTGATGGTGGAGCGTTTGTTGTAGT 1137578 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTC 1485632 | |||||||| |||||||| ||||||| |||| ||||| Sbjct 1137579 GGGCCAGGCGAGAGGCCTCGGCAGCGATGCGCTCGAAGATGTC 1137621 >seq11 Length=11183424 Score = 127 bits (140), Expect = 3e-23 Identities = 166/227 (73%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || |||||||| | ||||| || ||| ||| Sbjct 383512 TGTACTTGGTGACGGCCTTGGTTCCCTCAGACACGGCGTGTTTAGCCAGCTCCCCGGGCA 383453 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| | ||| || || || | ||| | | || ||| ||| ||||||||| || | Sbjct 383452 GCAGCAGCCTCACCGCAGTTTGCACCTCTCTGCTGGTGATGGTGGAGCGCTTGTT-GTAC 383394 Query 1485590 -GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 | ||||||||| || || ||| | || | |||| || ||| ||||| || |||||| Sbjct 383393 TGAGCCAGGCGGGACGCTTCTGTGGCAATCCTCTCGAACAGGTCATTGACGAAGGAGTTC 383334 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTG 1485695 ||||| ||| | | || | || || ||| ||| || || ||||| Sbjct 383333 ATGATGCTCATGGCTCTGCTCGAAATCCCCGTGTCCGGATGAACCTG 383287 >seq38 Length=4945250 Score = 111 bits (122), Expect = 2e-18 Identities = 115/151 (76%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 2069564 TCCACAGGCCGCGCGCCATCATGCGCTCGACCAGGTGGCGGTTGACCACGGTAAAGTCGC 2069623 |||||| ||| | | | ||| | | || ||||||| ||||||| | ||| || | Sbjct 1347746 TCCACATGCCCCTCTCTGTCAGGTCTTTGAGCAGGTGGGGGTTGACGATCTGAAACTCCC 1347687 Query 2069624 CCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATGACCTCGCACGCCTCGGTGTTGC 2069683 |||||||||| ||||| |||||||||||||| ||| | ||||| | |||| |||||| Sbjct 1347686 CCGAGAGCACCCGGCGGGTGTAGATGTTGCTTGTGTAGGCCTCGATGGACTCGTTGTTGC 1347627 Query 2069684 CCAGGATCTGCGACGTCGTGGCCGTGGGCAT 2069714 |||||||||| | || | |||||||||||| Sbjct 1347626 CCAGGATCTGGGCGGTGGAGGCCGTGGGCAT 1347596 Score = 105 bits (116), Expect = 1e-16 Identities = 154/217 (71%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||| || ||||| ||||| |||| ||| | || | | ||| || || || |||||||| Sbjct 1346656 CTGATCAACATAACGCGCTGTGTTGTTGTAAACCCTCAACATTGGGACGAGCCCGTTGGA 1346597 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGC----GCACCTTGTGCGCGGCAA 2073655 |||||||||||| || | |||| |||| || | ||| || | || | Sbjct 1346596 ACAGCCGTTGGTGCCGGCGATGTAGCTCCCCGTGGATCTAATGCAGCTGA----CTGCCA 1346541 Query 2073656 AGCCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGC 2073715 ||| || || ||||| | ||||||||||| ||||| | |||||||| |||||||| | Sbjct 1346540 CGCCAATCCCTCCGGCTGATTTGGAGATGAGGGCGCAATGCTTCAGCGTGTCGTAGATCC 1346481 Query 2073716 CCTCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCA 2073752 ||||||| ||| |||||||| | | ||| ||||| Sbjct 1346480 CCTCGATGCTGTCATCCTTCATGGCGAGCAGGAAGCA 1346444 >seq29 Length=6224470 Score = 93.3 bits (102), Expect = 7e-13 Identities = 103/136 (76%), Gaps = 1/136 (1%) Strand=Plus/Minus Query 794339 CACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCT 794398 ||||| |||| | ||||| | |||||| ||| ||||||||||| ||||| | || Sbjct 1441027 CACCT-CGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCT 1440969 Query 794399 TCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAA 794458 |||| ||||| |||||||| ||| ||||||||| ||||| ||||| || ||||||| Sbjct 1440968 TCTTCAGCCAGAAGATGGCGGCGAACGAGCCCGAGAAGAAGATCCCCTCCACAGCGGCAA 1440909 Query 794459 AGCCGACGAGCCGCTC 794474 || | || | ||||| Sbjct 1440908 AGGCCACCACGCGCTC 1440893 Score = 93.3 bits (102), Expect = 7e-13 Identities = 103/136 (76%), Gaps = 1/136 (1%) Strand=Plus/Plus Query 794339 CACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCT 794398 ||||| |||| | ||||| | |||||| ||| ||||||||||| ||||| | || Sbjct 1451400 CACCT-CGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCT 1451458 Query 794399 TCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAA 794458 |||| ||||| |||||||| ||| ||||||||| ||||| ||||| || ||||||| Sbjct 1451459 TCTTCAGCCAGAAGATGGCGGCGAACGAGCCCGAGAAGAAGATCCCCTCCACAGCGGCAA 1451518 Query 794459 AGCCGACGAGCCGCTC 794474 || | || | ||||| Sbjct 1451519 AGGCCACCACGCGCTC 1451534 >seq13 Length=10688992 Score = 87.8 bits (96), Expect = 3e-11 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 796303 ACCTCCTCGGCGGTCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGG 796362 |||||||| ||||||| || ||||||| ||||| ||||||||||| ||| || | || Sbjct 6293362 ACCTCCTCCACGGTCCAGAAAGAGGCCTGGGCCTGTTTGTACATCTTCCAGATGTCTCGG 6293303 Query 796363 TAGCGGATGGGGAACAGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTC 796415 || ||||||| || | ||||| || | |||||||| || ||||| || || Sbjct 6293302 TACTGGATGGGAAAAATGACAAACCGCCTTGGGTTCTCTCGGAGCAGAGGTTC 6293250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915278497869461