Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neolamprologus_20brichardi_20[refseq_20GCF_5F000239395.1_202011-12- 22] 9,099 sequences; 847,910,432 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq9 257 1e-62 seq81 100 2e-15 >seq9 Length=13701132 Score = 257 bits (284), Expect = 1e-62 Identities = 890/1376 (65%), Gaps = 12/1376 (1%) Strand=Plus/Minus Query 281432 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 281491 ||||| ||||| || |||||||| | |||||||| || || || || || || |||| Sbjct 9628110 ACATTTAGAATGCCGTTGGCATCGATGTCAAATGTTACGTCTATCTGTGGAACACCTCGG 9628051 Query 281492 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 281551 |||| || ||||| ||| | | |||| | |||||| || || | ||| || | Sbjct 9628050 GGAGCTGGAGGGATACCTGTGAGGTCAAATTTGCCCAGAAGGTTGTTGTATTTGGTCATG 9627991 Query 281552 TTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTA 281611 || || || || || | || || || | | || |||||||| || || | Sbjct 9627990 GCTCTCTCGCCTTCAAATACCTGAATCAATACACCTGGCTGGTTATCTGAGTATGTGGAG 9627931 Query 281612 AATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAAT 281670 || | |||| | | || || ||||| ||||||| | || | | ||||||| Sbjct 9627930 AAGA-TCTGAGTCTGCTTTGTGGGGATTGTGGTGTTTCGCTTTATCAGAGGTGTCATAAC 9627872 Query 281671 ACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTG 281730 ||| || || ||||| | || ||||| || |||| |||||| | || | | || ||| Sbjct 9627871 ACCGCCTGCGGTTTCAATGCCCAGAGACAGGGGAGCGACATCCAGCAGCAGCAGATCTTG 9627812 Query 281731 AAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAAC 281790 | || || || | || | || || |||||||| | || ||||| || || || Sbjct 9627811 GACATTCTCTGAGGTGTCGCCCATGAGGATGGCTGCTTGTACTGCTGCACCGTAGGCTAC 9627752 Query 281791 AGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT-TGAAAGAA 281849 ||||||||| || |||| | | || || | ||| ||||| || || | || |||| Sbjct 9627751 AGCTTCATCTGGGTTAATGCTCTTGTTCAGGTCTTTGCCATTAAAGAAGTCCTGTAAGAG 9627692 Query 281850 GTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCA-CCTGT 281908 || | | || ||||| | | || || || || | ||||||||||| | |||| Sbjct 9627691 CTTCTGG-ATTTTGGGAATTCTTGTGGAGCCACCGACCAGGACAATTTCATGAATCCTG- 9627634 Query 281909 GATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAAC 281968 ||||||||||| || | |||| | |||| || || || |||| | || || Sbjct 9627633 GATTTATCCAGCTTGGCATCCTGCAGGGCTTTCTCGACTGGGCCAAGTGTTCCCCTGAAA 9627574 Query 281969 AAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCT 282028 | ||||| || || || || || || || | | | | | |||||||||| Sbjct 9627573 AGATCTGAGTTGAGCTCCTCAAAACGTGCCCTTGTGATGGAGGTGTAAAAATCAATTCCC 9627514 Query 282029 TCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCA 282088 || || | ||| || | ||||| | | ||||| || |||| | | || || Sbjct 9627513 TCAAAGAGAGAGTCGATCTCAATGCTTGCCTGAGTGCTGGAGGATAAGGTCCTCTTTGCC 9627454 Query 282089 CGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCTGTTT-- 282146 | || || ||||| | | ||| | | ||| | || ||| | ||| | || Sbjct 9627453 CTCTCGCAAGCTGTACGCAATCTCCTCACTGCTCT--CTTATTCTGGCTAATGTCCTTCT 9627396 Query 282147 TATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCAC 282206 | | |||||| || || || || ||| | | || | | || ||||| || || | Sbjct 9627395 TGTGTTTTCTTTTAAATTCCTCTACAAAGTGCTTGACCATTTGGTTGTCAAAGTCCTCCC 9627336 Query 282207 CTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACA 282266 | || | | || | |||||| || ||| | || | || | ||| |||||| | || Sbjct 9627335 CACCAAGGTGTGTGTCTCCTGAAGTGGCTTTGACCTCAAAGATGCCAGCTTCAATGGTCA 9627276 Query 282267 AAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTT-TG 282325 || || |||||| ||| || || || | |||||| || || ||||| |||| || Sbjct 9627275 GAATAGACACATCAAAGGTGCCTCCGCCAAGATCAAAGATCAGCACATTGCGTTCTCCTG 9627216 Query 282326 TCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTC 282385 | ||| ||| ||| || ||||| |||| || || || || || |||||||| || ||| Sbjct 9627215 TTTTGCCTTT-ATCCAGGCCATATGCAATGGCTGCTGCTGTGGGCTCATTAATGATCCTC 9627157 Query 282386 AAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTA 282445 | |||||| || |||| || || ||||| || || |||||||| ||||| ||||| Sbjct 9627156 AGAACATTTAGTCCAGAGATCACCCCAGCATCCTTCGTAGCTTGTCTCTGTGAGTCGTTG 9627097 Query 282446 AAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCT 282505 ||||| || || || || || || || | || || || ||| | || || ||| Sbjct 9627096 AAATAAGCTGGCACTGTGATGACTGCGTTTGACACCCTTTGTCCCAGGTAGGCCTCAGCT 9627037 Query 282506 GTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGAT 282565 | | ||||||||| | | ||| || ||||||| || ||| | || ||||| Sbjct 9627036 ATCTCCTTCATTTTAACCAGGACCATGGAGGAAATTTCCTCAGGATAGAATGCCTTGGTC 9626977 Query 282566 TCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGC 282625 || || ||| || | | | || || | | | | ||| || || || ||| Sbjct 9626976 TCCCCTTTGTATTCCACCTGGACTTTGGGCTTTCCATTATCGTCAATCACCTTGAAAGGC 9626917 Query 282626 CAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTT 282685 || ||||| || || || || | |||||||||| | ||| ||||| | ||||| Sbjct 9626916 CAGAGCTTCATGTCGGACTGTACGACTGGGTCATTAAACTTTCTTCCAATCAGCCGTTTG 9626857 Query 282686 GCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATC 282745 |||||||| || || || | || || | |||| |||| | ||||| ||||||||||| Sbjct 9626856 GCATCAAAGATTGTGTTATTGGGGTTCATTGCAACTTGGTTCTTGGCAGCATCTCCAATA 9626797 Query 282746 AGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATC 282801 || |||||| || ||||| | ||||| |||||| || | ||| || ||||| Sbjct 9626796 AGCCTTTCTGTGTCGGTAAAAGCCACATAGCTTGGAGTGGTTCTATTGCCCTGATC 9626741 >seq81 Length=2813517 Score = 100 bits (110), Expect = 2e-15 Identities = 111/148 (75%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 ||||| || || ||||| |||| |||||||| || || ||||| || || | | ||| Sbjct 2420497 TTTTTGTCCAGGCCATAGGCAATGGCAGCAGCGGTGGGCTCATTGATGATACGAAGGACA 2420556 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 ||||| |||| ||| | ||||||||||| ||||| || | || || ||||| || || Sbjct 2420557 TTAAGCCCAGAAATGGTCCCTGCATCTTTGGTGGCCTGGCGCTGAGAGTCGTTGAAGTAG 2420616 Query 282452 GCAGGAACAGTAATAACGGCATCTGTTA 282479 ||||| ||||| | |||||| ||||| Sbjct 2420617 GCAGGCACAGTCACTACGGCACTTGTTA 2420644 Score = 87.8 bits (96), Expect = 1e-11 Identities = 131/185 (71%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 282693 AAATA--GTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATG 282750 ||||| || ||| |||| || | || |||| | ||||||||||| |||||||| Sbjct 2421130 AAATACTGTGTTGTTTGGGTTCAAGGCCACTTGGTTCTTGGCTGCATCCCCAATCAGCCT 2421189 Query 282751 TTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAAT 282810 || || || || |||| |||||| || || || | || || || ||||| ||||| Sbjct 2421190 CTCCGTGTCAGTGAATGCAACATAACTGGGTGTAGTCCTGTTTCCCTGGTCATTGGCAAT 2421249 Query 282811 AATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAAT 282870 |||||| ||||| |||| ||| | || |||||||| | || || || | ||||| Sbjct 2421250 AATTTCCACTTTGCCATGTTGAAAAACTCCTACACAGGAGTAGGTAGTGCCCAGGTCAAT 2421309 Query 282871 ACCAA 282875 ||||| Sbjct 2421310 ACCAA 2421314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740183677552374