Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neolamprologus_20brichardi_20[refseq_20GCF_5F000239395.1_202011-12- 22] 9,099 sequences; 847,910,432 total letters Query= NC_024696.1 Length=180800 Score E Sequences producing significant alignments: (Bits) Value seq57 114 1e-20 >seq57 Length=4092092 Score = 114 bits (126), Expect = 1e-20 Identities = 241/354 (68%), Gaps = 9/354 (3%) Strand=Plus/Plus Query 176946 GCCAGTTCTATAGGGGACGTGTAGTCGTTCACGTGAATGAAAGCGTCTCCCGGGACGTAA 177005 |||| ||| | || || || |||||| || |||||||| | ||||||| ||| | Sbjct 1239111 GCCAATTCCTTGGGCGAGCTGAAGTCGTCAACATGAATGAAGGAGTCTCCCTGGATAAAG 1239170 Query 177006 TTTTCGTAATTCTCTCTCGATGTTCCGAGTACTATGGGTACCGCACCTGCCATAAGAGAT 177065 || |||||||||| || | || ||||| || | || || | || | | |||| Sbjct 1239171 TTCTCGTAATTCTGCCTGGGTGGGCCGAGAACCACTGGCACTGTCCCCAC--TGAGAGTG 1239228 Query 177066 CG--GTAGAGTTTTTCGGTAATATAGTCCCTGTGTACGGAGTTCTCAAACGCGAGATAGA 177123 | ||| ||||| || ||||| || || |||| | ||||||||||||||| ||||||| Sbjct 1239229 GGTTGTACAGTTTCTCTGTAATGTAATCTTTGTGAATGGAGTTCTCAAACGCCAGATAGA 1239288 Query 177124 ATTTACAG--GAAGATAGTAGCGGGATGAAGTCATCATCGGGTATATAATCTCCTACTAC 177181 | || ||| | ||| || |||| | |||| | || | || || ||||| | | Sbjct 1239289 ACTTGCAGCTGGCGATGGT--GGGGAAGTAGTCTTGGTCAGAGATGTACTCTCCAAAGGC 1239346 Query 177182 GTTCCCGTATACATGTATATCTATGTGTTTACTGAGCTCTAGGTAGTATCTCGATCTCAC 177241 | || ||| |||| | || |||||||| ||| || || ||| || | ||| Sbjct 1239347 CTGTCCATATGCATGAACCTCAATGTGTTTGTAGAGTTCATTATAATATTTCACCCGCAC 1239406 Query 177242 GTGGTCGTTGTTCCAATTGCTGACGACCCAGCAAACTAACTTGCTCTTTGCGGG 177295 ||| || | |||||| ||||| || | |||||||| | |||| | ||||| || Sbjct 1239407 GTGATCCTGGTTCCAGTTGCTCACAATCCAGCAAATCAGCTTG-TTTTTGCTGG 1239459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578366210590400