Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neolamprologus_20brichardi_20[refseq_20GCF_5F000239395.1_202011-12- 22] 9,099 sequences; 847,910,432 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq65 89.7 3e-13 >seq65 Length=3759856 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| || | ||| | || | || || ||| ||| || || |||||||| ||||| Sbjct 3001580 CCACCCCTGAGACGCAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 3001521 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || || || ||||| |||| | |||||| || | || Sbjct 3001520 AGGGTGCGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGA 3001461 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||||| || || ||||| || | ||| ||| |||||| || | || || Sbjct 3001460 ATGCCTTCCTTATCCTGGATTTTGGCCTTGA-CATTCTCAATGGTGTCACTGGGCTCAAC 3001402 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || ||||| |||| ||||| |||||||||||||| Sbjct 3001401 CTCGAGAGTGATGGTCTTACCAGTTAGGGTTTTCACAAAGATCTGCAT 3001354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328667548678080