Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neolamprologus_20brichardi_20[refseq_20GCF_5F000239395.1_202011-12- 22] 9,099 sequences; 847,910,432 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq132 104 7e-19 seq7 102 3e-18 seq169 98.7 3e-17 seq9 98.7 3e-17 seq3 98.7 3e-17 seq90 96.9 1e-16 seq4505 95.1 4e-16 seq133 82.4 2e-12 seq74 82.4 2e-12 seq19 78.8 3e-11 >seq132 Length=1665529 Score = 104 bits (114), Expect = 7e-19 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||||| |||||||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct 385107 GCTGAAATAGCTCAGTTGGGAGAGCTTTAGACTGAAGATCTAAAGGTCTTTGGTTCAATC 385048 Query 2829 CCGGGCTTCAGC 2840 ||||| |||||| Sbjct 385047 CCGGGTTTCAGC 385036 >seq7 Length=15066089 Score = 102 bits (112), Expect = 3e-18 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 2765 TATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824 ||| || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 11529270 TATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTC 11529329 Query 2825 AACCCCGGGCTTCAGC 2840 | |||||| ||| || Sbjct 11529330 GATCCCGGGTTTCGGC 11529345 Score = 102 bits (112), Expect = 3e-18 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 2765 TATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824 ||| || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 11530770 TATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTC 11530829 Query 2825 AACCCCGGGCTTCAGC 2840 | |||||| ||| || Sbjct 11530830 GATCCCGGGTTTCGGC 11530845 Score = 100 bits (110), Expect = 9e-18 Identities = 72/82 (88%), Gaps = 2/82 (2%) Strand=Plus/Plus Query 2759 TGTGTTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCC 2818 ||||| || || ||| |||||||||||||||||| |||||||||||||||||||||||| Sbjct 1343849 TGTGTGTA--GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCC 1343906 Query 2819 TGGTTCAACCCCGGGCTTCAGC 2840 |||||| | |||||| ||| || Sbjct 1343907 TGGTTCGATCCCGGGTTTCGGC 1343928 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 6015514 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 6015455 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 6015454 CCGGGTTTCGGC 6015443 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 11527030 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 11527089 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 11527090 CCGGGTTTCGGC 11527101 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 11580523 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 11580582 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 11580583 CCGGGTTTCGGC 11580594 Score = 86.0 bits (94), Expect = 2e-13 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||||| |||||||| ||||||||| |||||||||||||||||||| |||| |||| | | Sbjct 6996051 GCTGAAATAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGACCCTAGTTCGATC 6995992 Query 2829 CCGGGCTTCAGC 2840 | ||| ||| || Sbjct 6995991 CTGGGTTTCGGC 6995980 >seq169 Length=1196624 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 315591 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 315532 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 315531 CCGGGTTTCGGC 315520 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2765 TATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824 ||| || ||| ||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 145307 TATTGCCGAAATAGCTCAGTTGGGAGAGTGTTAGACTGAAGATCTAAAGGTCCCTGGTCC 145248 Query 2825 AACCCCGGGCTT 2836 || |||||| || Sbjct 145247 AATCCCGGGTTT 145236 >seq9 Length=13701132 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 12275194 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 12275135 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 12275134 CCGGGTTTCGGC 12275123 >seq3 Length=19510765 Score = 98.7 bits (108), Expect = 3e-17 Identities = 69/79 (87%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 2762 GTTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGG 2821 |||| |||| ||| |||||||||||||||||| | ||||||||||||| |||| |||||| Sbjct 2309829 GTTTGTGGCCGAAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGGCCCTGG 2309888 Query 2822 TTCAACCCCGGGCTTCAGC 2840 ||||| |||||| ||| || Sbjct 2309889 TTCAATCCCGGGTTTCGGC 2309907 Score = 98.7 bits (108), Expect = 3e-17 Identities = 69/79 (87%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 2762 GTTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGG 2821 |||| | || ||| |||||||||||||||||| | ||||||||||||| ||||||||||| Sbjct 4263651 GTTTGTTGCCGAAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGG 4263592 Query 2822 TTCAACCCCGGGCTTCAGC 2840 ||||| |||||| ||| || Sbjct 4263591 TTCAATCCCGGGTTTCGGC 4263573 Score = 95.1 bits (104), Expect = 4e-16 Identities = 69/80 (86%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 2761 TGTTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTG 2820 ||| || || ||| |||||||||||||||||| | ||||||||||||| |||||||||| Sbjct 2311563 TGTGTAAAGCCGAAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTG 2311622 Query 2821 GTTCAACCCCGGGCTTCAGC 2840 |||||| |||||| ||| || Sbjct 2311623 GTTCAATCCCGGGTTTCGGC 2311642 Score = 95.1 bits (104), Expect = 4e-16 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 2764 TTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTT 2823 || |||| ||| |||||||||||||||||| | ||||| ||||||| ||||||||||||| Sbjct 2312521 TTGTGGCCGAAATAGCTCAGTTGGGAGAGCGTCAGACTAAAGATCTGAAGGTCCCTGGTT 2312462 Query 2824 CAACCCCGGGCTTCAGC 2840 ||| |||||| ||| || Sbjct 2312461 CAATCCCGGGTTTCGGC 2312445 Score = 95.1 bits (104), Expect = 4e-16 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 2764 TTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTT 2823 || |||| ||| |||||||||||||| ||| | ||||||||||||| ||||||||||||| Sbjct 2312955 TTGTGGCCGAAATAGCTCAGTTGGGATAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTT 2313014 Query 2824 CAACCCCGGGCTTCAGC 2840 ||| |||||| ||| || Sbjct 2313015 CAATCCCGGGTTTCGGC 2313031 Score = 91.5 bits (100), Expect = 5e-15 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 2761 TGTTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTG 2820 ||| || || ||| |||||||||||||||||| | ||||||||||||| |||||||||| Sbjct 2313917 TGTGTAAAGCCGAAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTG 2313858 Query 2821 GTTCAACCCCGGGCTTCAGC 2840 |||| | |||||| ||| || Sbjct 2313857 GTTCGATCCCGGGTTTCGGC 2313838 Score = 91.5 bits (100), Expect = 5e-15 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825 || || ||| |||||||||||||||||| | ||||||||| ||| ||||||||||||||| Sbjct 4267019 ATTGCCGAAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGTTCTGAAGGTCCCTGGTTCA 4266960 Query 2826 ACCCCGGGCTTCAGC 2840 | |||||| ||| || Sbjct 4266959 ATCCCGGGTTTCGGC 4266945 >seq90 Length=2559485 Score = 96.9 bits (106), Expect = 1e-16 Identities = 62/68 (91%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 ||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||| | Sbjct 125188 GCTGAAGTAGCTCAGTTGGGAGAGCGTTACACCGAAGATCTAAAGGTCCCTGGTTCAATC 125129 Query 2829 CCGGGCTT 2836 | ||| || Sbjct 125128 CTGGGGTT 125121 >seq4505 Length=1757 Score = 95.1 bits (104), Expect = 4e-16 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825 || || ||| |||||||||||||||||| | ||||||||||||| ||||||||||||||| Sbjct 1567 ATTGCCGAAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCA 1626 Query 2826 ACCCCGGGCTTCAGC 2840 | |||||| ||| || Sbjct 1627 ATCCCGGGTTTCGGC 1641 >seq133 Length=1649749 Score = 82.4 bits (90), Expect = 2e-12 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 2773 AAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 || || ||||| ||||||||||| ||||||||||||| |||||||||||||||| | || Sbjct 387679 AAATAACTCAGCTGGGAGAGCATCAGACTGAAGATCTGAAGGTCCCTGGTTCAATCTTGG 387738 Query 2833 GCTTCAGC 2840 | |||||| Sbjct 387739 GTTTCAGC 387746 >seq74 Length=3153132 Score = 82.4 bits (90), Expect = 2e-12 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| ||| |||||||| |||||| ||||||||||||||||||||||||| ||||||| | Sbjct 1810180 GGCCGAAATAGCTCAGCTGGGAGCGCATTAGACTGAAGATCTAAAGGTCACTGGTTCGAT 1810239 Query 2828 CCC 2830 ||| Sbjct 1810240 CCC 1810242 >seq19 Length=7756450 Score = 78.8 bits (86), Expect = 3e-11 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 || ||| | |||||||||||||||| | ||||||||||||| |||||||||||||||| Sbjct 7284680 GCCGAAATTGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAA 7284737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15848022642855