Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neolamprologus_20brichardi_20[refseq_20GCF_5F000239395.1_202011-12- 22] 9,099 sequences; 847,910,432 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq65 116 3e-21 seq92 98.7 9e-16 seq11 87.8 2e-12 >seq65 Length=3759856 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| || | || ||||||||||| || ||||| Sbjct 3001545 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCATCTTCCAGCTGCTTGCCAGCAAA 3001486 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||||||||| | |||| || ||||| ||| ||| || ||| | | | Sbjct 3001485 GATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCCTGGATTTTGGCCTTGACATT 3001426 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | || ||||| | ||||| || ||||| || | |||||||| Sbjct 3001425 CTCAATGGTGTCACTGGGCTCAACCTCGAGAGTGATGGTCTTACCAGTTAGGGTTTTCAC 3001366 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 3001365 AAAGATCTGCAT 3001354 >seq92 Length=2575742 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | ||| || | || ||||||||||| || ||||| Sbjct 2564007 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAA 2564066 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||||||||| | |||| || ||||| ||| ||| || ||| | | Sbjct 2564067 GATCAGCCTCTGCTGGTCAGGTGGAATGCCTTCCTTATCCTGGATTTTGGCCTTGACGTT 2564126 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | || ||||||| ||||| || || || || | || ||||| Sbjct 2564127 CTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCAC 2564186 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 2564187 AAAGATCTGCAT 2564198 >seq11 Length=11183424 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 44303 CGTAGGATGTATGTGGTCCATTTGCGGTGTCCACGAC-AGGGCGTGGCGAGAGCTACCCA 44361 |||||||||||||||||| |||||||| |||||||| ||||| |||| ||| | || Sbjct 8828377 CGTAGGATGTATGTGGTCTATTTGCGGCATCCACGACCAGGGCTGGGCG-GAGAGAGCCG 8828319 Query 44362 TCTACGGCAAAGTGCGCTACATGAACTACAACGGTTGCGTCAGAAAGTTT 44411 | | ||| || | ||||||||||||||||| || ||| | | |||||| Sbjct 8828318 TATTCGGGAAGATCCGCTACATGAACTACAAAGGCTGCCTTCGGAAGTTT 8828269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450742327862920