Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neolamprologus_20brichardi_20[refseq_20GCF_5F000239395.1_202011-12- 22] 9,099 sequences; 847,910,432 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq65 104 2e-17 >seq65 Length=3759856 Score = 104 bits (114), Expect = 2e-17 Identities = 145/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||| || || |||||||| || || || || ||||||||||| ||||| || Sbjct 3001351 AACATGCAGATCTTTGTGAAAACCCTAACTGGTAAGACCATCACTCTCGAGGTTGAGCCC 3001410 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | ||||| |||| ||| | || | ||||| || || ||||| | || || || Sbjct 3001411 AGTGACACCATTGAGAATGTCAAGGC-CAAAATCCAGGATAAGGAAGGCATTCCCCCCGA 3001469 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 || ||| | | || ||||| ||||| || |||||||| | ||||| | ||| || Sbjct 3001470 CCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGTCGCACCCTGTCCGACTA 3001529 Query 23787 CAACATACAAAAAGAGTCCAC 23807 |||||| || || |||||||| Sbjct 3001530 CAACATCCAGAAGGAGTCCAC 3001550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337972116742292