Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neolamprologus_20brichardi_20[refseq_20GCF_5F000239395.1_202011-12- 22] 9,099 sequences; 847,910,432 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq36 136 3e-27 seq201 125 5e-24 seq366 120 2e-22 seq87 87.8 1e-12 >seq36 Length=5414369 Score = 136 bits (150), Expect = 3e-27 Identities = 136/175 (78%), Gaps = 1/175 (1%) Strand=Plus/Plus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 |||||| ||||||||||| || || |||||||| ||||| || ||||| ||||| ||||| Sbjct 2792885 CATGTCTGTGTACTCTGCACCAAAGTGCCTCCACTGGAAACCATACACAGGTCCTAGGTC 2792944 Query 27549 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 27608 ||||| || |||| ||| || ||||||| ||||| | || |||||||| || Sbjct 2792945 ACCCTCCTCTCTGTCAGTGAACCCAAGGTTGTCCAGGAAGTCCCGAGACCCGTTGGCATC 2793004 Query 27609 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGAC 27662 ||||||||| || || || || || ||||| ||||| ||||| || |||| |||| Sbjct 2793005 CCAGATCTTCACTCCTTTTTCTGACAGCTCCTTGGAATTTGTTGATCCCTGTGAC 2793059 Score = 114 bits (126), Expect = 1e-20 Identities = 122/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 || || || | ||| || |||||||| || || || || |||||||||||||| || || Sbjct 2792073 AGTCCTGTAATGTGTGCAATCATGTAGGTAAGAAGTGAATAGCTGGCGATGTTGAAAGGC 2792132 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327 ||||| | ||||| || | || | |||||| ||||||||||| ||||| ||||| | Sbjct 2792133 ACCCCTAATCCCATATCAGCTGAGCGCTGGTACAGCTGACACGACAGCTCGCCATCACAC 2792192 Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCAT 27368 ||||| ||||| || | || ||||| || || || ||||| Sbjct 2792193 ACGTAGAACTGGCAGAGTGCATGGCAGGGGGGCAGCGCCAT 2792233 >seq201 Length=820151 Score = 125 bits (138), Expect = 5e-24 Identities = 177/246 (72%), Gaps = 6/246 (2%) Strand=Plus/Minus Query 69075 GTGAACGGATGGGGAAAGTTTTATATCCCCACCGCCGTGACGATGCAGGTCATCGGTTAT 69134 |||||||| |||||||| || || | | | ||| | ||||||||||||||| Sbjct 682646 GTGAACGGCTGGGGAAAATTCTACCTTCAAAAGATCGTAAACATGCAGGTCATCGGTGTG 682587 Query 69135 GTGACGGGAACTCCATACCAATGTGACCAGCTTGTCCTGATGACCTGCGAGGACCAGAAG 69194 ||| ||| | ||| | |||||| ||||||| ||||||||||| |||||| | ||| Sbjct 682586 GTGGAGGGCATCTCATGTCCATGTGATGAGCTTGTGCTGATGACCTGTGAGGACAAAAAG 682527 Query 69195 GTGTACGGCTATGACGGAGACGAGCTGCATGTGGTGGCTAACTGTCT---GGATCAGATG 69251 |||| | ||| |||||||| || ||||| |||||||| | || | ||| | || Sbjct 682526 CTGTATGCCTACGACGGAGAGAAGATGCATCTGGTGGCTTCCAGTTTCAAGGAAC-TATC 682468 Query 69252 GGGGAAGAAGGAATAGCCTATCCTGCATTCCAGAGCTATTATCATGGGGAGGCCTTCAAA 69311 | || |||| ||| ||||| |||| ||||||| || |||| |||||||||||| Sbjct 682467 TGAGA--GAGGATTAGAGTATCCAGCATCAGAGAGCTACTACAATGGAGAGGCCTTCAAA 682410 Query 69312 CATATG 69317 ||||| Sbjct 682409 GATATG 682404 >seq366 Length=153907 Score = 120 bits (132), Expect = 2e-22 Identities = 180/254 (71%), Gaps = 4/254 (2%) Strand=Plus/Plus Query 69066 CCTGCAGTGGTGAACGGATGGGGAAAGTTTTATATCCCCACCGCCGTGACGATGCAGGTC 69125 ||||| | || ||||| ||||||| || || | || || | || | ||||| || Sbjct 132059 CCTGCTGATGTAAACGGCTGGGGAAGATTCTACCTTCCAACGACTGTAAACATGCAAGTT 132118 Query 69126 ATCGGTTATGTGACGGGAACTCCATACCAATGTGACCAGCTTGTCCTGATGACCTGCGAG 69185 | || |||| ||| | ||| | || |||||||| || ||||||||||| ||| Sbjct 132119 GTTGGCATTGTGGAGGGCATCTCATGTCTGTGCGACCAGCTCGTTCTGATGACCTGTGAG 132178 Query 69186 GACCAGAAGGTGTACGGCTATGACGGAGACGAGCTGCATGTGGTGGCT--AACTGTCTGG 69243 ||| | ||||||||| |||||| ||||| ||||| ||| |||||||| || |||| Sbjct 132179 GACAAACAGGTGTACGCCTATGATGGAGAGGAGCTTCATCTGGTGGCTTCAAGTGTC--A 132236 Query 69244 ATCAGATGGGGGAAGAAGGAATAGCCTATCCTGCATTCCAGAGCTATTATCATGGGGAGG 69303 | ||| | || ||||| || | ||||| |||| | ||| ||| || | ||||||| Sbjct 132237 AGCAGCTACTTGATGAAGGGATGGAGTATCCAGCATCCAAGACCTACTACAAGGGGGAGG 132296 Query 69304 CCTTCAAACATATG 69317 |||||||| | ||| Sbjct 132297 CCTTCAAAGACATG 132310 >seq87 Length=2722511 Score = 87.8 bits (96), Expect = 1e-12 Identities = 117/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 69155 ATGTGACCAGCTTGTCCTGATGACCTGCGAGGACCAGAAGGTGTACGGCTATGACGGAGA 69214 |||||||||||| | |||||||||| |||||||| ||||||||| || ||| | ||| Sbjct 1782512 ATGTGACCAGCTCATTCTGATGACCTTTGAGGACCAACAGGTGTACGCCTGTGATGAAGA 1782453 Query 69215 CGAGCTGCATGTGGTGGCTAACTGTCTGGATCAGATGGGGGAAGAAGGAATAGCCTATCC 69274 ||||| ||| |||||||| | | | ||| | || || ||||| | ||||| Sbjct 1782452 GGAGCTTCATCTGGTGGCTTCAAGCTTCAAACAGCTATTCGATGAGGGAATGGAGTATCC 1782393 Query 69275 TGCATTCCAGAGCTATTATCATGGGGAGGCCTTCAAACATATG 69317 |||| | | | ||| || | ||||||| || ||| ||||| Sbjct 1782392 AGCATCCAAAACCTACTACAAGAGGGAGGCTTTTAAAAATATG 1782350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369466223845469