Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothobranchius_20furzeri_20[refseq_20GCF_5F001465895.1_202015-12-11] 5,897 sequences; 1,242,518,059 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq17 96.9 7e-15 seq12 96.9 7e-15 seq10 96.9 7e-15 seq9 96.9 7e-15 seq8 96.9 7e-15 seq3 96.9 7e-15 seq526 89.7 1e-12 seq19 89.7 1e-12 seq15 89.7 1e-12 seq1 89.7 1e-12 >seq17 Length=38284538 Score = 96.9 bits (106), Expect = 7e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| |||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 24980324 TGCCCGACTAGCTCAGTCGGTAGAGCGATAGACTCTTAATCTCAAGGTCGTGGGTTCGAG 24980265 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 24980264 CCCCACGCTGGGC 24980252 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 9316667 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 9316608 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 9316607 CCCACGTTGGGC 9316596 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 9319914 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 9319855 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 9319854 CCCACGTTGGGC 9319843 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 9320557 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 9320498 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 9320497 CCCACGTTGGGC 9320486 >seq12 Length=46076542 Score = 96.9 bits (106), Expect = 7e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| |||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 10343823 TGCCCGACTAGCTCAGTCGGTAGAGCGATAGACTCTTAATCTCAAGGTCGTGGGTTCGAG 10343764 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 10343763 CCCCACGCTGGGC 10343751 Score = 96.9 bits (106), Expect = 7e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| |||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 13729424 TGCCCGACTAGCTCAGTCGGTAGAGCGATAGACTCTTAATCTCAAGGTCGTGGGTTCGAG 13729365 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 13729364 CCCCACGCTGGGC 13729352 Score = 96.9 bits (106), Expect = 7e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| |||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 42480172 TGCCCGACTAGCTCAGTCGGTAGAGCGATAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 42480113 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 42480112 CCCCACGCTGGGC 42480100 >seq10 Length=57197669 Score = 96.9 bits (106), Expect = 7e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| |||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 8036648 TGCCCGACTAGCTCAGTCGGTAGAGCGATAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 8036589 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 8036588 CCCCACGCTGGGC 8036576 >seq9 Length=57367160 Score = 96.9 bits (106), Expect = 7e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| |||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 44779974 TGCCCGACTAGCTCAGTCGGTAGAGCGATAGACTCTTAATCTCAAGGTCGTGGGTTCGAG 44779915 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 44779914 CCCCACGCTGGGC 44779902 >seq8 Length=57680405 Score = 96.9 bits (106), Expect = 7e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| |||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 20226020 TGCCCGACTAGCTCAGTCGGTAGAGCGATAGACTCTTAATCTCAAGGTCGTGGGTTCGAG 20225961 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 20225960 CCCCACGCTGGGC 20225948 Score = 96.9 bits (106), Expect = 7e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| |||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 51828046 TGCCCGACTAGCTCAGTCGGTAGAGCGATAGACTCTTAATCTCAAGGTCGTGGGTTCGAG 51827987 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 51827986 CCCCACGCTGGGC 51827974 >seq3 Length=76488725 Score = 96.9 bits (106), Expect = 7e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| |||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 1113955 TGCCCGACTAGCTCAGTCGGTAGAGCGATAGACTCTTAATCTCAAGGTCGTGGGTTCGAG 1113896 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 1113895 CCCCACGCTGGGC 1113883 >seq526 Length=158403 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 125542 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 125483 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 125482 CCCACGTTGGGC 125471 >seq19 Length=25483538 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 8781742 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 8781683 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 8781682 CCCACGTTGGGC 8781671 >seq15 Length=41915801 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 29200017 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 29199958 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 29199957 CCCACGTTGGGC 29199946 >seq1 Length=98476147 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 71686449 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 71686390 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 71686389 CCCACGTTGGGC 71686378 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 78477117 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 78477058 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 78477057 CCCACGTTGGGC 78477046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057744075777110