Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothobranchius_20furzeri_20[refseq_20GCF_5F001465895.1_202015-12-11] 5,897 sequences; 1,242,518,059 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq8 104 2e-17 >seq8 Length=57680405 Score = 104 bits (114), Expect = 2e-17 Identities = 126/172 (73%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 18964 TCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTG 19023 ||||| | |||| || || || || ||| | | || ||||| ||||| | || | Sbjct 19731466 TCCCCCTCATGGCTCTGCCCCCGTGCCACGCTCTGTGCCAGTTCTACGTCTGTGATGGCG 19731525 Query 19024 AATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACA 19083 | | ||||| || | |||||| |||||| |||||||| |||||||| |||||||||| Sbjct 19731526 AGCTGTCCTGTCAGCTGTACCAGCGATCGGCCGATATGGGTCTTGGGGTGCCGTTCAACA 19731585 Query 19084 TTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAA 19135 | || | ||||| ||||| |||||||| | || || |||||||||| || Sbjct 19731586 TCGCCAGCTATGCTCTTCTCACCTACATGATCGCTCACATTACAGGACTCAA 19731637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399475287772365