Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothobranchius_20furzeri_20[refseq_20GCF_5F001465895.1_202015-12-11] 5,897 sequences; 1,242,518,059 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq8 98.7 7e-16 >seq8 Length=57680405 Score = 98.7 bits (108), Expect = 7e-16 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 101759 TGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCC 101818 ||||| |||||| | || | ||||| |||||| || ||||| || ||||| || | ||| Sbjct 19731622 TGAGCGATCATGTAGGTGAGAAGAGCATAGCTGGCGATGTTGAACGGCACCCCAAGACCC 19731563 Query 101819 ATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTG 101877 ||||| || |||| || ||||| |||||||| |||| ||||||||||| || || || Sbjct 19731562 ATATCGGCCGATCGCTGGTACAGCTGACAGGACAGCTCGCCATCACAGACGTAGAACTG 19731504 Score = 89.7 bits (98), Expect = 4e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092 |||| || ||||| || || ||||||||||| || || ||||||||||| ||||| || | Sbjct 19730751 CTTTGTACTCTGCACCAAAGTGCCTCCACTGGAAACCGTACACAGGTCCCAGATCCCCCT 19730692 Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152 | |||||||| || || ||||| || | ||| | | || || || |||||||||| Sbjct 19730691 CCTCTCTGTCCGTGAAGCCCAGTTTGTCCAGAAAGGCCCGGGACCCGTTGGCATCCCAAA 19730632 Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTTG 102181 | ||| || |||| ||||| ||| Sbjct 19730631 TCCTCACACCTTTGTCTGACAGCTCCTTG 19730603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361225236989147