Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothobranchius_20furzeri_20[refseq_20GCF_5F001465895.1_202015-12-11] 5,897 sequences; 1,242,518,059 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq10 87.8 2e-12 >seq10 Length=57197669 Score = 87.8 bits (96), Expect = 2e-12 Identities = 173/254 (68%), Gaps = 4/254 (2%) Strand=Plus/Plus Query 83143 GAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTG 83202 ||||||||| |||||||||| ||||||| | | || ||| || |||| ||| || Sbjct 47712817 GAACTTCTCAAAGTTCCAGGACACGTCGCTCCTGCTCACCGGGCTCCAGATGATGTACTT 47712876 Query 83203 GGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGGAA 83262 |||||| ||| || | |||||| || || || || || ||| ||||| Sbjct 47712877 GGGGTCATTCATCAGGGGTGAAGGGTCGTCACTGGGGGCTGGAAGCTGCTCCTTCAGGAA 47712936 Query 83263 GGCGAAGAGCGGAT--GTGCCCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAAAG 83320 | || || |||| | |||||| | | || || | |||||| | |||| || Sbjct 47712937 CACAAACAGGGGATCGGCGCCCTTCC--CATTCACATTCACCTTCTCCAGGAGCTGGAAC 47712994 Query 83321 TTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATTC 83380 || ||| | ||||| || ||||||||||||| |||||| || ||| ||| || ||||| Sbjct 47712995 TTTGGCGCAAAGCCATTTCCAGGACGGACGTACTTCAGAGACAGCAGGATTTCTTCATTC 47713054 Query 83381 TGGGCGTTTTCCTG 83394 | | ||| ||||| Sbjct 47713055 TCGCTGTTCTCCTG 47713068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608751924065880