Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothobranchius_20furzeri_20[refseq_20GCF_5F001465895.1_202015-12-11] 5,897 sequences; 1,242,518,059 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq4 96.9 6e-15 >seq4 Length=75030901 Score = 96.9 bits (106), Expect = 6e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 51901 TGGTTGTACTATATATCCAAAGGGATAGAATACTTGGATACGGTATTTTTCATACTTAGG 51960 |||| |||||| || |||||||| | |||| ||||||||| || ||||||||||| ||| Sbjct 63214595 TGGTGGTACTACATCTCCAAAGGAGTGGAATTCTTGGATACAGTCTTTTTCATACTGAGG 63214654 Query 51961 AAAAAATTTAATCAGGTTAGTTTTCTACACGTATATCATCATTTTACTATGTTTACTCTA 52020 || || || || || || || || || ||||| || || || | ||| ||||| | || Sbjct 63214655 AAGAAGTTCAACCAAGTCAGCTTCCTTCACGTCTACCACCACTGTACCATGTTCATCCTC 63214714 Query 52021 GGATGGATAGGTATTAAATGG 52041 | ||||| || || || ||| Sbjct 63214715 TGGTGGATTGGCATCAAGTGG 63214735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923128748855880