Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothobranchius_20furzeri_20[refseq_20GCF_5F001465895.1_202015-12-11] 5,897 sequences; 1,242,518,059 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq6 113 1e-19 >seq6 Length=67274854 Score = 113 bits (124), Expect = 1e-19 Identities = 230/340 (68%), Gaps = 4/340 (1%) Strand=Plus/Minus Query 248800 TACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTC 248859 |||| || |||||| ||| | ||||| | |||||||| |||||| || ||||| Sbjct 22088712 TACGACAGAGATTTCTCTTACAACTTCTTCGGCTTCAAAACCCTGGAGCGCTCCTATCTG 22088653 Query 248860 CTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTC 248919 || || || |||| || | | || || ||||||||| | ||| | ||| |||| Sbjct 22088652 CTGAAGATCAATGGAAAAGTGGCCGAGCGTCCGCAGCACATGCTCATGAGGGTGTCTGTT 22088593 Query 248920 GGGATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAATG--AGTGAAC 248977 ||||| || || ||||| || | | |||||||||| | || || ||| Sbjct 22088592 GGGATCCATGAGAGAGACATCGATGCAGCCATTGAGACGTACAACCTGCTGTCAGAGAAG 22088533 Query 248978 GCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGA 249037 ||| | || || ||| |||| || ||||||||||| || ||| | |||||| Sbjct 22088532 --TGGTTCACCCACGCCTCACCAACCCTCTTCAACGCAGGAACCAACCGGCCACAGCTGT 22088475 Query 249038 GCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTA 249097 | ||||| || || |||||| |||||||| |||| |||||||||||||| |||| Sbjct 22088474 CCAGCTGCTTCCTCCTCGCCATGAAAGACGACAGCATCGAAGGCATTTATGACACTCTTA 22088415 Query 249098 AACAGACGGCGAAGATTTCTAAATTCGCGGGCGGAATCGG 249137 | ||| || ||||| |||| ||| || || || || Sbjct 22088414 AGCAGTGTGCCCTCATTTCCAAATCCGCCGGAGGCATTGG 22088375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073685271244096