Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothobranchius_20furzeri_20[refseq_20GCF_5F001465895.1_202015-12-11] 5,897 sequences; 1,242,518,059 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq3 122 6e-23 >seq3 Length=76488725 Score = 122 bits (134), Expect = 6e-23 Identities = 134/176 (76%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 91815 CCTGCAAAGAGGACTACAACATCATCATGGACACTGTCAGACAA-CTGGAACAAAGTGGC 91873 || |||| ||||||| | ||||||||| || || | ||| ||| || || | || || Sbjct 65548146 CCAGCAAGGAGGACTGCGACATCATCACTGATACGG-CAGCCAAGCTCGAGCGTAGCGGA 65548088 Query 91874 TTCTACTGGGGTCCTTTGGGGGTCGAGGAGGCACATCGTATGCTGCGCAACTCGGCACTG 91933 ||||||||||| || |||| || |||||||| || || ||||| | | | | | ||| Sbjct 65548087 TTCTACTGGGGGCCCCTGGGAGTGGAGGAGGCCCACCGCATGCTACAGAGCGCCCCGCTG 65548028 Query 91934 GGCAGCTTTCTCATTCGGGATAGCAGGCAAAAGGACGTCTTGTTCACGCTGTCGTA 91989 |||||||| ||||| ||||| ||| | || |||| |||||| ||||||||||| || Sbjct 65548027 GGCAGCTTCCTCATCCGGGACAGCCGACAGAAGGGCGTCTTCTTCACGCTGTCCTA 65547972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356207997602491