Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothobranchius_20furzeri_20[refseq_20GCF_5F001465895.1_202015-12-11] 5,897 sequences; 1,242,518,059 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq2231 127 1e-24 seq150 127 1e-24 seq108 127 1e-24 seq17 127 1e-24 seq13 127 1e-24 seq9 127 1e-24 seq2 127 1e-24 seq16 116 2e-21 seq1861 95.1 8e-15 seq1800 95.1 8e-15 seq7 95.1 8e-15 seq12 93.3 3e-14 >seq2231 Length=25276 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||||||||| || ||||| || |||||||| Sbjct 3116 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGGAGGTAGGGACAGTGGGAATCTCGT 3175 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 3176 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 3210 >seq150 Length=90500 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||||||||| || ||||| || |||||||| Sbjct 83066 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGGAGGTAGGGACAGTGGGAATCTCGT 83125 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 83126 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 83160 Score = 95.1 bits (104), Expect = 8e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| | ||||||||| |||||||||||| Sbjct 85648 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTAAGGTACTTGTCGACTATCGGTCTCGT 85707 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 85708 GCCGGTATTTAGCCTTA 85724 >seq108 Length=114389 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||||||||| || ||||| || |||||||| Sbjct 70772 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGGAGGTAGGGACAGTGGGAATCTCGT 70713 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 70712 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 70678 >seq17 Length=38284538 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||||||||| || ||||| || |||||||| Sbjct 2489260 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGGAGGTAGGGACAGTGGGAATCTCGT 2489201 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 2489200 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 2489166 >seq13 Length=45871076 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||||||||| || ||||| || |||||||| Sbjct 14201318 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGGAGGTAGGGACAGTGGGAATCTCGT 14201377 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 14201378 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 14201412 >seq9 Length=57367160 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||||||||| || ||||| || |||||||| Sbjct 8165203 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGGAGGTAGGGACAGTGGGAATCTCGT 8165144 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 8165143 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 8165109 >seq2 Length=88342039 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||||||||| || ||||| || |||||||| Sbjct 26731524 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGGAGGTAGGGACAGTGGGAATCTCGT 26731465 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 26731464 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 26731430 Score = 95.1 bits (104), Expect = 8e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| | ||||||||| |||||||||||| Sbjct 16361080 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTAAGGTACTTGTCGACTATCGGTCTCGT 16361139 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 16361140 GCCGGTATTTAGCCTTA 16361156 >seq16 Length=39628156 Score = 116 bits (128), Expect = 2e-21 Identities = 129/172 (75%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 6319 ACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACG 6378 |||| || || | ||| || || ||||| ||||||||||| ||||||||| |||||||| Sbjct 3179550 ACCCAACCAAGTTTTTTGGTTGTGAACTCGGCGCTCAGACCCAGTTTGATGCCAAAAACG 3179491 Query 6379 AGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCT 6438 | |||| |||||| || ||||| || | | |||| ||||||| | ||||| || | Sbjct 3179490 ATCGCTACATCGTAAATGGATCCCACGAGGCGAACAAGTTGCAGGATATGCTTGATGGGT 3179431 Query 6439 TTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCT 6490 | || | || |||||||||||| || ||||| ||||| || || || || Sbjct 3179430 TCATCAGGAAATTTGTGCTGTGTACCGAGTGCGACAACCCTGAAACTGATCT 3179379 >seq1861 Length=28369 Score = 95.1 bits (104), Expect = 8e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| | ||||||||| |||||||||||| Sbjct 26126 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTAAGGTACTTGTCGACTATCGGTCTCGT 26185 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 26186 GCCGGTATTTAGCCTTA 26202 >seq1800 Length=30095 Score = 95.1 bits (104), Expect = 8e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| | ||||||||| |||||||||||| Sbjct 26475 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTAAGGTACTTGTCGACTATCGGTCTCGT 26534 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 26535 GCCGGTATTTAGCCTTA 26551 >seq7 Length=63666967 Score = 95.1 bits (104), Expect = 8e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| | ||||||||| |||||||||||| Sbjct 29942871 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTAAGGTACTTGTCGACTATCGGTCTCGT 29942812 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 29942811 GCCGGTATTTAGCCTTA 29942795 >seq12 Length=46076542 Score = 93.3 bits (102), Expect = 3e-14 Identities = 80/98 (82%), Gaps = 7/98 (7%) Strand=Plus/Plus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 ||||||||||||||||||| |||||||| |||| || ||||| || ||| ||||| Sbjct 22522801 GCCCGTTCCCTTGGCTGTGATTTCGCTAAATAGGAGGTAGGGACTGTGGGAATATCGTTC 22522860 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGAC--GATAT 25994 |||| || |||| |||||||||||| ||||| ||||| Sbjct 22522861 ATCCATTAATGCACGTCACTAATTAAATGACAAGATAT 22522898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334923127449407