Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothobranchius_20furzeri_20[refseq_20GCF_5F001465895.1_202015-12-11] 5,897 sequences; 1,242,518,059 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq11 87.8 2e-12 >seq11 Length=48234189 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || ||||||||||| || | || || ||||||||| || || ||| Sbjct 21620151 GTGGACTCCTTCTGAATGTTGTAGTCTGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCA 21620210 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| || || || || |||||||| ||||| ||||| ||| Sbjct 21620211 GCAAAGATCAGCCTCTGCTGATCTGGGGGGATGCCTTCCTTGTCCTGGATCTTAGCTTTG 21620270 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| | | ||||| |||| ||| | || || || || || || Sbjct 21620271 ACATTCTCAATGGTGTCACTTGGCTCGACCTCCAGGGTGATGGTCTTTCCAGTAAGGGTC 21620330 Query 114366 TTTACAAAAATCTGCATG 114383 || ||||| ||||||||| Sbjct 21620331 TTGACAAAGATCTGCATG 21620348 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || ||||||||||| || | || || ||||||||| || || ||| Sbjct 37620336 GTGGACTCCTTCTGAATGTTGTAGTCTGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCA 37620395 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| || || || || |||||||| ||||| ||||| ||| Sbjct 37620396 GCAAAGATCAGCCTCTGCTGATCTGGGGGGATGCCTTCCTTGTCCTGGATCTTAGCTTTG 37620455 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| | | ||||| |||| ||| | || || || || || || Sbjct 37620456 ACATTCTCAATGGTGTCACTTGGCTCGACCTCCAGGGTGATGGTCTTACCAGTGAGGGTC 37620515 Query 114366 TTTACAAAAATCTGCATG 114383 || ||||| ||||||||| Sbjct 37620516 TTGACAAAGATCTGCATG 37620533 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || ||||||||||| || | || || ||||||||| || || ||| Sbjct 21619923 GTGGACTCCTTCTGAATGTTGTAGTCTGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCA 21619982 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| || || || || |||||||| ||||| ||||| ||| Sbjct 21619983 GCAAAGATCAGCCTCTGCTGATCTGGGGGGATGCCTTCCTTGTCCTGGATCTTAGCTTTG 21620042 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| | | ||||| |||| ||| | || || || || || || Sbjct 21620043 ACATTCTCAATGGTGTCACTTGGCTCGACCTCCAGGGTGATGGTCTTTCCTGTGAGGGTC 21620102 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 21620103 TTGACAAAGATCTGCAT 21620119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420104205071964