Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothobranchius_20furzeri_20[refseq_20GCF_5F001465895.1_202015-12-11] 5,897 sequences; 1,242,518,059 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq13 93.3 3e-14 >seq13 Length=45871076 Score = 93.3 bits (102), Expect = 3e-14 Identities = 123/171 (72%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 118136 GACGTCGTTGGCGCCGTAAAAGGCGATACACTCCGACAGTTTTCCGTCGCGACCGGCCCT 118195 ||||||| || | |||||| ||| || | || | | ||| || | |||||||| Sbjct 23561333 GACGTCGGTGTAGGAGTAAAACAGGATGCAGTGAGAGACCTCTCCATCTCTGCCGGCCCT 23561392 Query 118196 TCCTATCTCTTGATAATAACCGTCCAGTGATTTGGGCATACTGTGATGTATCACCAACCG 118255 ||| ||| ||||| ||||| |||| |||||| |||| |||| || ||||| | || Sbjct 23561393 TCCCGACTCCTGATAGTAACCCTCCACTGATTTAGGCAAACTGGCGTGGATCACGTAGCG 23561452 Query 118256 CACGTCGGGTTTATCGATGCCCATCCCGAACGCTATCGTCGAACATATCAC 118306 ||| || || || ||||| ||||| ||||| ||||| || | ||| || || Sbjct 23561453 CACATCCGGCTTGTCGATACCCATACCGAAGGCTATGGTGGCACAGATAAC 23561503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381745362108168