Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nothobranchius_20furzeri_20[refseq_20GCF_5F001465895.1_202015-12-11]
5,897 sequences; 1,242,518,059 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq4911 262 5e-65
seq11 197 2e-45
seq233 165 1e-35
seq6 159 5e-34
seq2 87.8 2e-12
seq17 86.0 8e-12
>seq4911
Length=55064
Score = 262 bits (290), Expect = 5e-65
Identities = 1013/1583 (64%), Gaps = 10/1583 (1%)
Strand=Plus/Plus
Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358
|| || || ||||| | || || || ||||| ||||| || || | ||| | |
Sbjct 40809 GCCATCGGCATCGACCTGGGCACCACCTACTCCTGTGTGGGGGTTTTCCAACACGGAAAA 40868
Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418
|| ||||| ||| | || ||||| || ||| | || || || || || ||||| ||
Sbjct 40869 GTGGAGATCATCGCCAACGACCAGGGCAACAGGACCACCCCCAGCTATGTGGCCTTCACT 40928
Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478
|| | || | || |||| || || || || || ||| ||| ||||||| | |||
Sbjct 40929 GACACAGAGAGGCTGATTGGGGACGCAGCCAAGAACCAGGTGGCTCTGAACCCCAGCAAC 40988
Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGA-TAAGAAAGTCCAAGA 195537
||||| ||||| || ||| | || ||||| | | |||| || | || || || |
Sbjct 40989 ACTGTGTTTGATGCCAAGAGGCTGATTGGAAGAAGGTTTGATGACTCAGTG-GTGCAGGC 41047
Query 195538 CGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAA 195597
||| || ||| ||||| | | | || ||| | | || | ||||| | ||| |
Sbjct 41048 CGACATGAAGCACTGGCCCTTCAAGGTGGTTTCAGATGGAGGG---AAGCCCAAAATTCA 41104
Query 195598 TGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTT 195657
|| || | | || ||||| || || | || || || ||||| || ||||| |
Sbjct 41105 AGTGGAGTACAAAGGAGAGAACAAGACCTTCTCCCCTGAGGAGATTTCCTCCATGGTCCT 41164
Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717
| | ||||||||||||| ||| || | | | |||| | | ||| | || || |
Sbjct 41165 GGTGAAGATGAAGGAGATTGCTGAGGCCTACCTGGGCCACAAGGTGTCCAAAGCTGTCAT 41224
Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777
|| || || || || |||| || || || |||||||| || || ||||| | | ||
Sbjct 41225 CACGGTCCCGGCCTATTTCAACGACTCCCAGCGACAGGCCACTAAAGACGCCGGCGTCAT 41284
Query 195778 TGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGG 195837
|| || || ||| || || || ||||| || || || || ||||| || || || ||
Sbjct 41285 CGCAGGACTCAACGTCCTGAGGATCATCAACGAGCCCACGGCAGCTGCCATCGCATACGG 41344
Query 195838 TCTGGACAAGAACA--AGGAC-GAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGG 195894
|||||||| || ||| | | ||| ||| || ||||||| ||||| ||||| ||
Sbjct 41345 ACTGGACAAAAAAGGCAGGTCAGGAGAACGAAACGTCCTGATCTTCGATCTGGGTGGAGG 41404
Query 195895 TACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGC 195954
|| || || || || | || | ||||| | || || || || || ||||| || ||
Sbjct 41405 CACCTTCGACGTGTCCATCCTGACCATTGATGACGGCATCTTTGAGGTGAAGGCCACGGC 41464
Query 195955 TGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTGTCTG 196013
||||| ||||| || || || || || || || || | | || ||||| |
Sbjct 41465 CGGTGACACTCACCTGGGAGGAGAGGACTTTGACAACCGCATGGTGAACCACTTTGTG-G 41523
Query 196014 ATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGC 196073
| |||||| | || | ||||| || || || || || | | |||
Sbjct 41524 AGGAGTTCAAGAGGAAACACAAGAAGGACATCAGCCATAACAAGAGAGCCTTGAGGAGGC 41583
Query 196074 TTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTG 196133
| | ||||| ||||| | |||||| | || || || || | | || | | | |
Sbjct 41584 TGCGCACTGCTTGTGAGAGGGCCAAAAGGACCCTGTCCTCCAGCTCCCAGGCCAGCATCG 41643
Query 196134 AGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTG 196193
|||| || || ||||||| || ||||||||||| || | || ||| | || || ||||
Sbjct 41644 AGATCGACTCCCTGTTTGAGGGCATTGACTTCTACACCTCCATCACCAGGGCTCGCTTTG 41703
Query 196194 AAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTG 196253
| ||| | ||| || |||| ||| | |||| ||||| || ||| || |
Sbjct 41704 AGGAGCTGTGCTCCGACCTGTTCAGGGGGACCTTGGAGCCTGTGGAGAAAGCTCTGAAGG 41763
Query 196254 ACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTA 196313
|||| || ||||| ||| || | | || | ||||| |||||||| |||||| | |
Sbjct 41764 ACGCCAAAATGGACAAGGGACAGATCCACGACGTCGTCCTGGTGGGAGGCTCAACCAGAA 41823
Query 196314 TTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGA 196373
| || |||||||| | | || ||||||||| | || | ||||| | |
Sbjct 41824 TCCCCAAGATTCAGAAACTCCTGCAGGACTTCTTCAACGGTCGGGAGCTGAACAAGAGCA 41883
Query 196374 TCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTG 196433
||||||| ||||| || || ||||| || || ||||| ||||| || || ||| |||| |
Sbjct 41884 TCAACCCAGATGAGGCGGTGGCTTACGGCGCCGCCGTCCAGGCCGCCATCCTCACAGGCG 41943
Query 196434 TTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTC 196493
| |||||||| || || || || || || || ||||| | || |||||
Sbjct 41944 ACACCTCGGGCAACGTCCAGGACCTGCTTCTGCTGGACGTGGCACCTCTGTCACTGGGGA 42003
Query 196494 TTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTA 196553
| || || || || || || ||||| | || | | ||||| || || || | |
Sbjct 42004 TCGAGACTGCCGGAGGAGTGATGACGTCCCTGATCAAACGCAACACCACCATCCCAGCCA 42063
Query 196554 AGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTAT 196613
| | || || || | || ||| | || || || || || || | || || || |
Sbjct 42064 AACAAACCCAGGTGTTCACTACTTATGCTGACAACCAGCCCGGGGTCCTGATCCAGGTCT 42123
Query 196614 ATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGG 196673
| ||||| || | || | ||||| ||| | || || || | || || || | |
Sbjct 42124 ACGAAGGTGAGAGAGCCATGACCAAGGACAACAACCTGCTGGGCAAGTTTGAGCTGTCTG 42183
Query 196674 GGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAA 196733
| || ||| | || ||| |||| || || ||||| | || || || || || || |
Sbjct 42184 GAATCCCACCCGCTCCCCGAGGGGTCCCTCAGATCGAGGTCACTTTTGACATCGATGCCA 42243
Query 196734 ATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGA 196793
| || || | ||||| | || | ||||||| | |||||| | ||||| |
Sbjct 42244 ACGGCATATTGAACGTGTCTGCGGTGGACAAGAGCACGGGCAAAGAGAACAAGATCACCA 42303
Query 196794 TTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGG 196853
| ||||| |||||||| || || || ||||| || || ||||| || || || |
Sbjct 42304 TCACCAACGACAAGGGCCGACTGAGCAAAGAGGAGATCGAGAAGATGGTCCAGGACGCTG 42363
Query 196854 AAAAGTACAGGGAAGAAGACGAG 196876
| || |||| | || ||||||
Sbjct 42364 ACAAATACAAAGCTGAGGACGAG 42386
>seq11
Length=48234189
Score = 197 bits (218), Expect = 2e-45
Identities = 180/227 (79%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| |||||||| || |||||||||||||| || |||||||| ||||| ||| |
Sbjct 21620347 ATGCAGATCTTTGTCAAGACCCTTACTGGAAAGACCATCACCCTGGAGGTCGAGCCAAGT 21620288
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| || || || ||||||| ||||| || || ||||||||||| || || ||||||
Sbjct 21620287 GACACCATTGAGAATGTCAAAGCTAAGATCCAGGACAAGGAAGGCATCCCCCCAGATCAG 21620228
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| | || || |||||||| || |||||||||||||| || |||||| | || ||||||
Sbjct 21620227 CAGAGGCTGATCTTTGCTGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCAGACTACAAC 21620168
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088
|||| |||||||| || || |||||||| || | || |||||||
Sbjct 21620167 ATTCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGTGG 21620121
Score = 194 bits (214), Expect = 2e-44
Identities = 179/227 (79%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| |||||||| || ||||| ||||| || || |||||||| ||||||||| |
Sbjct 37620760 ATGCAGATCTTTGTCAAGACCCTCACTGGTAAGACCATCACCCTGGAGGTTGAGCCAAGT 37620701
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| ||||| ||| | ||||||||||| || || ||||||||||| || || || |||
Sbjct 37620700 GACACCATCGAGAACGTGAAAGCCAAGATCCAGGACAAGGAAGGCATCCCTCCTGACCAG 37620641
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| | || || |||||||| |||||||| |||||||| || |||||| | || ||||||
Sbjct 37620640 CAGAGGCTGATCTTTGCTGGCAAACAGCTGGAAGATGGCCGCACCCTCTCAGACTACAAC 37620581
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088
| || |||||||| || || |||||||| || | ||| | |||||
Sbjct 37620580 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTTAGAGGTGG 37620534
Score = 188 bits (208), Expect = 9e-43
Identities = 178/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| |||||||| || ||||| || ||||| || |||||||| ||||| ||| |
Sbjct 21620119 ATGCAGATCTTTGTCAAGACCCTCACAGGAAAGACCATCACCCTGGAGGTCGAGCCAAGT 21620060
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| || || || ||||||| ||||| || || ||||||||||| || || ||||||
Sbjct 21620059 GACACCATTGAGAATGTCAAAGCTAAGATCCAGGACAAGGAAGGCATCCCCCCAGATCAG 21620000
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| | || || |||||||| || |||||||||||||| || |||||| | || ||||||
Sbjct 21619999 CAGAGGCTGATCTTTGCTGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCAGACTACAAC 21619940
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088
|||| |||||||| || || |||||||| || | || |||||||
Sbjct 21619939 ATTCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGTGG 21619893
Score = 188 bits (208), Expect = 9e-43
Identities = 178/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| |||||||| || ||||| ||||| || || |||||||| ||||| ||| |
Sbjct 37620532 ATGCAGATCTTTGTCAAGACCCTCACTGGTAAGACCATCACCCTGGAGGTCGAGCCAAGT 37620473
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| || || || ||||||| ||||| || || ||||||||||| || || ||||||
Sbjct 37620472 GACACCATTGAGAATGTCAAAGCTAAGATCCAGGACAAGGAAGGCATCCCCCCAGATCAG 37620413
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| | || || |||||||| || |||||||||||||| || |||||| | || ||||||
Sbjct 37620412 CAGAGGCTGATCTTTGCTGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCAGACTACAAC 37620353
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088
|||| |||||||| || || |||||||| || | || |||||||
Sbjct 37620352 ATTCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGTGG 37620306
Score = 176 bits (194), Expect = 6e-39
Identities = 368/543 (68%), Gaps = 8/543 (1%)
Strand=Plus/Minus
Query 195866 AATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAA 195925
||||| | ||||||||||| ||||| || || ||||||||||| | | | |||||||
Sbjct 12755878 AATGTCCTCATCTTTGATCTTGGTGGAGGCACCTTTGATGTCTCCATCTTGACTATTGAA 12755819
Query 195926 GGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTC 195985
| ||| || || || |||||| | || ||||||||||||||||| ||||| || || ||
Sbjct 12755818 GATGGCATCTTTGAGGTAAAGTCAACAGCTGGTGATACTCATCTTGGTGGAGAGGACTTT 12755759
Query 195986 GATGCACGTCTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATT 196045
|| || | || ||||| || |||||| || || | ||||| || ||
Sbjct 12755758 GACAACCGCATGGTCAACCATTTCATTGCCGAGTTCAAGCGTAAATACAAGAAGGACATC 12755699
Query 196046 TCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACT 196105
| || |||||| | || || || | || || ||||| | || || || ||
Sbjct 12755698 AGCGACAACAAGAGGGCTGTCCGCCGTCTGCGCACCGCTTGTGAGAGGGCAAAGCGTACC 12755639
Query 196106 CTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTC 196165
|| ||||| | |||| | | | || || || || | | ||| ||| | ||||||
Sbjct 12755638 CTGTCTTCCAGCACTCAGGCCAGCATCGAAATCGACTCACTCTATGAGGGAGTCGACTTC 12755579
Query 196166 TATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGT 196225
|| || | || ||| | || || ||||| ||| | || ||||| | || |
Sbjct 12755578 TACACTTCCATCACCAGGGCTCGGTTTGAGGAGCTCAATGCTGATCTTTTCCGTGGCACC 12755519
Query 196226 ATGGAACCTGTTGAACAAGTAC-TTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGA 196284
|||| |||||||| |||| | ||||||| || ||||||||||| || || ||||
Sbjct 12755518 CTGGACCCTGTTGAG-AAGTCCCTTCGTGATGCCAAGATGGATAAAGGCCAGATTCATGA 12755460
Query 196285 AATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTT-TCTAG-- 196341
|| ||| | || || || || |||||||| || || ||| |||| |||| || ||
Sbjct 12755459 CATCGTCTTGGTTGGTGGTTCCACCCGTATCCCAAAAATT---CAGAAGCTTCTCCAGGA 12755403
Query 196342 CTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGG 196401
||| |||||| ||||| | ||||| | ||||| || |||||||| || || || ||
Sbjct 12755402 CTTTTTCAATGGAAAAGAGCTGAACAAGAGCATCAATCCAGATGAAGCTGTAGCATACGG 12755343
Query 196402 TGC 196404
||
Sbjct 12755342 AGC 12755340
Score = 129 bits (142), Expect = 8e-25
Identities = 109/134 (81%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 171940 AAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCT 171999
||||||||||| || || ||||||||||| || || || ||||| | || || ||||||
Sbjct 37620029 AAAGCCAAGATCCAGGACAAGGAAGGCATCCCTCCTGACCAGCAGAGGCTGATCTTTGCT 37619970
Query 172000 GGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACT 172059
|| |||||||| |||||||| ||||||||| | || |||||| | || |||||||| ||
Sbjct 37619969 GGCAAACAGCTGGAAGATGGCCGTACCCTCTCAGACTACAACATCCAGAAGGAGTCCACC 37619910
Query 172060 CTACACCTTGTTCT 172073
|| |||||||| ||
Sbjct 37619909 CTCCACCTTGTCCT 37619896
Score = 93.3 bits (102), Expect = 6e-14
Identities = 132/186 (71%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 195303 TTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAG 195362
|||| |||||| | || || || ||||| ||||||||||| | ||| ||| || |
Sbjct 12756682 TTGGAATCGATCTGGGGACCACCTACTCCTGTGTTGGTGTGTTCCAACATGGCAAAGTTG 12756623
Query 195363 AGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATA 195422
| || || | ||||||||||| ||| | || || || || || ||||| |||||
Sbjct 12756622 AAATCATTGCCAATGACCAAGGCAACAGGACCACACCCAGCTATGTGGCCTTCACAGACT 12756563
Query 195423 ATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTG 195482
|| | || |||||||||| ||||| || ||| || |||||||| | ||| ||||
Sbjct 12756562 CAGAGAGGCTAATTGGAGATGCAGCAAAGAACCAGGTTGCCATGAACCCAACCAACACTG 12756503
Query 195483 TCTTTG 195488
| ||||
Sbjct 12756502 TGTTTG 12756497
Score = 89.7 bits (98), Expect = 7e-13
Identities = 111/152 (73%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 195698 ACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCG 195757
||||| || |||| || | || || || || ||||| | ||| || || || |||||
Sbjct 12756122 ACTGTCAACAATGCTGTAATCACAGTTCCCGCCTACTTTAATGACTCTCAGCGCCAGGCC 12756063
Query 195758 ACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACA 195817
||||| || |||| | || | || || || ||| | || ||||||||||||||
Sbjct 12756062 ACAAAAGATGCTGGCACAATCTCTGGCCTTAATGTTCTCCGTATCATCAATGAACCAACT 12756003
Query 195818 GCGGCTGCAATTGCTTATGGTCTGGACAAGAA 195849
|| ||||| ||||| ||||| |||||||||||
Sbjct 12756002 GCAGCTGCTATTGCCTATGGGCTGGACAAGAA 12755971
>seq233
Length=80912
Score = 165 bits (182), Expect = 1e-35
Identities = 362/540 (67%), Gaps = 2/540 (0%)
Strand=Plus/Plus
Query 195866 AATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAA 195925
||||| | || |||||||| ||||||||||| |||||||| ||| | |||| |||||
Sbjct 71240 AATGTCCTCATTTTTGATCTTGGTGGTGGTACATTTGATGTGTCAATCCTCACGATTGAG 71299
Query 195926 GGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTC 195985
| ||| || || || || ||||| || || || || || ||| | |||||||| || ||
Sbjct 71300 GATGGCATCTTTGAGGTCAAGGCCACAGCAGGCGACACACATTTGGGTGGTGAGGACTTT 71359
Query 195986 GATGCACGTCTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATT 196045
|| || | | ||| || || ||||||| || ||| || || || ||
Sbjct 71360 GACAACCGCATGGTTAATCACTTCATTGCTGAGTTCAAGCGCAAGTTCAAAAAGGACATC 71419
Query 196046 TCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACT 196105
| ||| | ||| | ||||| || | ||||| || || ||||| || || ||
Sbjct 71420 ATCAGCAATAAGCGAGCTGTGCGTCGTCTGCGCACTGCGTGCGAGCGTGCAAAGCGCACC 71479
Query 196106 CTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTC 196165
||||| | | || | | |||| ||||| ||| | | ||| || | ||||||
Sbjct 71480 CTCTCGAGCAGCACCCAGGCCAGCATTGAAATTGACTCGCTTTATGAAGGTACAGACTTC 71539
Query 196166 TATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAG-GAAGTG 196224
|| || | || ||| | || || ||||||||| | || | || |||| | | | |
Sbjct 71540 TACACCTCAATCACCAGGGCTCGCTTTGAAGAGCTCAATGCAGACCTGTTCCGCGGAACG 71599
Query 196225 TATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGA 196284
| ||||| || || ||| || | || || || ||||| ||||| || | ||||
Sbjct 71600 -CTTGAACCAGTGGAGAAAGCTCTCAGAGATGCCAAAATGGACAAGTCCCAGATCCATGA 71658
Query 196285 AATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTT 196344
||||| || || || ||||| || ||||| || ||||| ||| || | || |||
Sbjct 71659 CATTGTTCTGGTAGGTGGATCCACACGTATCCCTAAGATCCAAAAGCTTCTGCAGGACTT 71718
Query 196345 CTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGC 196404
||||||| | |||||||| || | |||||||| ||||| || || |||||||| ||
Sbjct 71719 CTTCAATGGTCGTGATTTAAATAAGAGCATCAACCCAGATGAGGCTGTGGCTTATGGGGC 71778
Score = 102 bits (112), Expect = 1e-16
Identities = 114/150 (76%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 195701 GTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACA 195760
||||| |||||||| | || || ||||||||||||| ||| || || || || || ||
Sbjct 70991 GTGAACAATGCAGTTATCACAGTTCCTGCTTACTTCAATGACTCTCAGCGTCAAGCAACC 71050
Query 195761 AAGGACGCTGCTGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGC 195819
|| ||||||| | || | ||||| || ||| || |||| ||||||||||| |||||
Sbjct 71051 AAAGACGCTGGGACAATCTCTGGTCTTAA-TGTGCTGCGAATCATCAATGAACCCACAGC 71109
Query 195820 GGCTGCAATTGCTTATGGTCTGGACAAGAA 195849
||||| ||||| || || ||||| || ||
Sbjct 71110 TGCTGCTATTGCATACGGCCTGGATAAAAA 71139
Score = 98.7 bits (108), Expect = 1e-15
Identities = 132/184 (72%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 195305 GGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAGAG 195364
||||| ||||| || || || || || |||||||| | | ||| ||| || |||
Sbjct 70339 GGTATTGATTTGGGTACCACCTATTCCTGTGTTGGAATCTTCCAACATGGCAAAGTGGAG 70398
Query 195365 ATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAAT 195424
||||| | ||||||||||||||| | || || || || || ||||| ||||| | |
Sbjct 70399 ATTATTGCCAATGACCAAGGAAACAGGACCACACCCAGTTATGTGGCCTTCACAGACACT 70458
Query 195425 GAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTC 195484
|| | ||| |||||||||| || || || ||| || ||||| || |||||||||
Sbjct 70459 GAGAGACTCCTTGGAGATGCTGCCAAGAACCAGGTGGCCATGAATCCAGCCAATACTGTA 70518
Query 195485 TTTG 195488
||||
Sbjct 70519 TTTG 70522
>seq6
Length=67274854
Score = 159 bits (176), Expect = 5e-34
Identities = 358/533 (67%), Gaps = 6/533 (1%)
Strand=Plus/Plus
Query 195875 ATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATA 195934
|||||||| || ||||| || || ||||| ||||| | | | |||||| | ||| ||
Sbjct 12188583 ATCTTTGACCTTGGTGGCGGCACCTTTGACGTCTCCATCTTGACTATTGAGGATGGCATC 12188642
Query 195935 TTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGT 195994
|| || || ||||| || ||||| || || || || ||||||||||| || || ||
Sbjct 12188643 TTTGAGGTGAAGGCCACAGCTGGCGACACACACCTGGGTGGTGAAGACTTTGACAATCGC 12188702
Query 195995 CTTCTCCGTCATTTG-TCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAA 196053
| || || || ||| |||||| || ||| | |||||||| || | ||
Sbjct 12188703 ATGGTCAACCACTTCATCTCG-GAGTTCAAACGCAAGTACAAGAAAGACATCAGCGACAA 12188761
Query 196054 TCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTC 196113
||||| | || || || | || || ||||| || ||||| || || || || ||
Sbjct 12188762 CAAGAGGGCAGTGCGGCGTCTGCGCACAGCGTGTGAGCGAGCCAAGCGCACCCTATCCTC 12188821
Query 196114 TACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAAC 196173
| | || | | |||| || ||||| | | || || || |||||||| || |
Sbjct 12188822 GAGCACCCAGGCCAGCCTTGAAATCGATTCCCTATACGAGGGCATCGACTTCTACACCTC 12188881
Query 196174 TATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAG--GAAGTGTATGGAA 196231
|| || | || || ||||| ||| | ||| |||| ||||||| ||| | | |||
Sbjct 12188882 CATCACTAGGGCGCGGTTTGAGGAGCTTAACGCTGACCTGTTTAGAGGAACTCTT--GAA 12188939
Query 196232 CCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTC 196291
|| || ||| | | || ||||||||||| ||||| ||| || || | | || |||||
Sbjct 12188940 CCCGTGGAAAAGGCTCTCCGTGACGCAAAAATGGACAAGGCTCAGATCCACGACATTGTT 12188999
Query 196292 CTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAAT 196351
| |||||||| || ||||| || || ||||| || || |||| ||||||||||
Sbjct 12189000 TTAGTGGGAGGTTCTACCCGCATCCCTAAGATCCAGAAGCTGCTGCAGGACTTCTTCAAT 12189059
Query 196352 AATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGC 196404
|| || | ||||| | || ||||| ||||| || || || || || ||
Sbjct 12189060 GGGAAGGAGCTCAACAAGAGCATTAACCCTGATGAGGCCGTGGCATACGGCGC 12189112
>seq2
Length=88342039
Score = 87.8 bits (96), Expect = 2e-12
Identities = 124/174 (71%), Gaps = 3/174 (2%)
Strand=Plus/Plus
Query 195814 AACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATT 195873
||| || ||||| ||||||||||| ||||||||| | ||| | || || || | |
Sbjct 55284016 AACTGCTGCTGCCATTGCTTATGGCCTGGACAAG---AGGGATGGCGAGAAGAACATCCT 55284072
Query 195874 GATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTAT 195933
| |||||||| |||||||| || || || ||||| || | | ||||| ||| |
Sbjct 55284073 TGTTTTTGATCTGGGTGGTGGCACCTTCGACGTCTCCCTCTTGACCATTGATAACGGTGT 55284132
Query 195934 ATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987
|| ||||| ||||| |||||| || ||||| || ||||| ||||||||
Sbjct 55284133 CTTTGAAGTGGTTGCTACCAATGGTGACACCCATCTGGGAGGTGAGGATTTCGA 55284186
>seq17
Length=38284538
Score = 86.0 bits (94), Expect = 8e-12
Identities = 75/92 (82%), Gaps = 1/92 (1%)
Strand=Plus/Plus
Query 171961 GAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGA 172020
||||| || || || |||||||| || || || |||||||| ||||||||||| |||||
Sbjct 14424014 GAAGGAATCCCCCCTGATCAGCAGCGTCTGATCTTTGCTGGAAAACAGCTTGAGGATGGG 14424073
Query 172021 CGTACCCTCGCTGATTACAACGTTCA-AAAGG 172051
|||||||| | || |||||| |||| |||||
Sbjct 14424074 CGTACCCTATCAGACTACAACATTCAGAAAGG 14424105
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657813907317840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |