Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothobranchius_20furzeri_20[refseq_20GCF_5F001465895.1_202015-12-11] 5,897 sequences; 1,242,518,059 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq11 165 5e-36 >seq11 Length=48234189 Score = 165 bits (182), Expect = 5e-36 Identities = 178/234 (76%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| ||||||| | |||||| ||||| | |||| ||||||||||||||| ||||| | Sbjct 21620119 TTCCACCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCTG 21620178 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | ||| |||| |||| || || ||||| || || |||||||| | ||||| ||| | | Sbjct 21620179 AGAGGGTGCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGGG 21620238 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTC 34926 | | || |||||||| | || || |||||| || || || | ||| | | ||| Sbjct 21620239 GGATGCCTTCCTTGTCCTGGATCTTAGCTTTGAC--ATTCTCAATGGTGTCACTTGGCTC 21620296 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 ||| || | ||| ||||||||||| || |||||||| ||||||||||||||||| Sbjct 21620297 GACCTCCAGGGTGATGGTCTTTCCAGTAAGGGTCTTGACAAAGATCTGCATGAT 21620350 Score = 161 bits (178), Expect = 6e-35 Identities = 176/232 (76%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| ||||||| | |||||| ||||| | |||| ||||||||||||||| ||||| | Sbjct 37620304 TTCCACCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCTG 37620363 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | ||| |||| |||| || || ||||| || || |||||||| | ||||| ||| | | Sbjct 37620364 AGAGGGTGCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGGG 37620423 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTC 34926 | | || |||||||| | || || |||||| || || || | ||| | | ||| Sbjct 37620424 GGATGCCTTCCTTGTCCTGGATCTTAGCTTTGAC--ATTCTCAATGGTGTCACTTGGCTC 37620481 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||| || | ||| |||||||| || ||||||||||| ||||||||||||||| Sbjct 37620482 GACCTCCAGGGTGATGGTCTTACCAGTGAGGGTCTTGACAAAGATCTGCATG 37620533 Score = 159 bits (176), Expect = 2e-34 Identities = 174/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | |||||| ||||| | |||| ||||||||||||||| ||||| || Sbjct 21619893 CCACCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCTGAG 21619952 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| |||| || || ||||| || || |||||||| | ||||| ||| | || Sbjct 21619953 AGGGTGCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGGGGG 21620012 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | || |||||||| | || || |||||| || || || | ||| | | ||||| Sbjct 21620013 ATGCCTTCCTTGTCCTGGATCTTAGCTTTGAC--ATTCTCAATGGTGTCACTTGGCTCGA 21620070 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | ||| ||||||||||| ||||||||||| |||||||||||||| Sbjct 21620071 CCTCCAGGGTGATGGTCTTTCCTGTGAGGGTCTTGACAAAGATCTGCAT 21620119 Score = 138 bits (152), Expect = 7e-28 Identities = 159/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 |||||| ||||| | |||| ||||||||| ||||| ||||| || ||| |||| |||| Sbjct 37620548 CAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGAGAGGGTGCGGCCATC 37620607 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| || || || || |||||||| | |||||||| | || | || |||||||| Sbjct 37620608 TTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTC 37620667 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || ||| ||| | || | ||| | | ||| || || | ||| ||||| Sbjct 37620668 CTGGATCTTGGCTTTCACGTTCTCGATGGTGTCACTTGGCTCAACCTCCAGGGTGATGGT 37620727 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||| || ||||||||||| ||||||||||||||| Sbjct 37620728 CTTACCAGTGAGGGTCTTGACAAAGATCTGCATG 37620761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325669392560243