Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothobranchius_20furzeri_20[refseq_20GCF_5F001465895.1_202015-12-11] 5,897 sequences; 1,242,518,059 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq11 95.1 9e-15 >seq11 Length=48234189 Score = 95.1 bits (104), Expect = 9e-15 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || || | |||||| || | || || ||||| || || || ||||| || || | Sbjct 37620534 CCACCTCTAAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGAG 37620593 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || |||||||||||| | |||| || ||||| || || || Sbjct 37620594 AGGGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGG 37620653 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || ||||| || | || ||| || | || | |||||| | || || Sbjct 37620654 ATGCCTTCCTTGTCCTGGATCTTGGCTTTCACGTTCTCGATGGTGTCACTTGGCTCAACC 37620713 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || || || || ||||| | ||| || ||||| |||||||| || Sbjct 37620714 TCCAGGGTGATGGTCTTACCAGTGAGGGTCTTGACAAAGATCTGCATGTT 37620763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385191514416477