Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothobranchius_20furzeri_20[refseq_20GCF_5F001465895.1_202015-12-11] 5,897 sequences; 1,242,518,059 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq16 89.7 5e-13 >seq16 Length=39628156 Score = 89.7 bits (98), Expect = 5e-13 Identities = 109/146 (75%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCA 21184 ||||| ||||| || | ||||| || | || ||||||| ||| |||| |||||| Sbjct 11518264 AGCATCTGGGGCCCGACATGCGACGGTCTGGACCGCATTGTGGAGCAGTGTTCCCTGCCA 11518323 Query 21185 GAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAGC 21244 || || || |||||||||||||| | ||||| |||||||| || |||| | | | | || Sbjct 11518324 GACCTGCAGGTGGGCGACTGGCTGGTGTTTGACAACATGGGAGCCTACACCGTAG-CTGC 11518382 Query 21245 -TCTTCAACCTTTAACGGCTTCCCAA 21269 || || || || |||||||||| || Sbjct 11518383 GTCCTCCACATTCAACGGCTTCCAAA 11518408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463511430894960