Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothobranchius_20furzeri_20[refseq_20GCF_5F001465895.1_202015-12-11] 5,897 sequences; 1,242,518,059 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq8 140 4e-28 >seq8 Length=57680405 Score = 140 bits (154), Expect = 4e-28 Identities = 137/177 (77%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| || || || | ||| || | |||||||||||| || | |||||||| |||||||| Sbjct 19731638 CTTGAGTCCTGTAATGTGAGCGATCATGTAGGTGAGAAGAGCATAGCTGGCGATGTTGAA 19731579 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 || ||||| || ||||| || |||| | |||||||||||| || || ||||| || || Sbjct 19731578 CGGCACCCCAAGACCCATATCGGCCGATCGCTGGTACAGCTGACAGGACAGCTCGCCATC 19731519 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTC 147158 ||||| ||||||||||| ||||||||| ||||| |||||| ||| ||||| Sbjct 19731518 ACAGACGTAGAACTGGCACAGAGCGTGGCACGGGGGCAGAGCCATGAGGGGGAGGTC 19731462 Score = 98.7 bits (108), Expect = 1e-15 Identities = 116/156 (74%), Gaps = 6/156 (4%) Strand=Plus/Minus Query 147283 GCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGC 147342 || |||||||||||||||||||| |||||||| || ||||| || || || ||||| | Sbjct 19730740 GCACCAAAGTGCCTCCACTGGAAACCGTACACAGGTCCCAGATCCCCCTCCTCTCTGTCC 19730681 Query 147343 GAGAAGCCCGCCCGCTTG---AGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACT 147399 | ||||| || | ||| ||||| | ||||||||| ||| ||||| || | ||| Sbjct 19730680 GTGAAGC---CCAGTTTGTCCAGAAAGGCCCGGGACCCGTTGGCATCCCAAATCCTCACA 19730624 Query 147400 CCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCC 147435 || ||| | || |||||||| | | ||||| ||| Sbjct 19730623 CCTTTGTCTGACAGCTCCTTGGCATTTGTGGACCCC 19730588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583444989640800