Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothobranchius_20furzeri_20[refseq_20GCF_5F001465895.1_202015-12-11] 5,897 sequences; 1,242,518,059 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq4 95.1 1e-14 >seq4 Length=75030901 Score = 95.1 bits (104), Expect = 1e-14 Identities = 104/136 (76%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 77302 GATGTGCAGCCAGACAACCTCCAGCTCCAAATTGAGTTGGTCCAGCTTCATAAAGTCATC 77361 ||| | || |||||| ||||||||||| | || || | ||||||||||| ||||| || Sbjct 71510457 GATATTCACCCAGACCACCTCCAGCTCAGAGTTCAGCTCATCCAGCTTCATGAAGTCCTC 71510398 Query 77362 CTTGTT-GACAACTGACCCTCCGCCATGCAGCCTCCAGCCGTTCTGCTTCCAGTTCTTAA 77420 || ||| | || | ||| | | | | |||||||||||| ||| |||||||| |||| | Sbjct 71510397 CTGGTTGGTCACATTACCGCCAGAC-TTCAGCCTCCAGCCATTCAGCTTCCAGGTCTTCA 71510339 Query 77421 CCCACTTAGTCACACC 77436 |||| | |||||||| Sbjct 71510338 CCCAGCTGGTCACACC 71510323 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 77576 AGCGGGTGATTATAACCCCAATATACGCCAATGCCAGCTCGGGCTTGTTTCTGTCCGTTT 77635 || ||||| || | |||||| | || || ||||||||||||||| | |||| ||||| Sbjct 71508600 AGTGGGTGGTTGTGACCCCAGAAGACCCCGATGCCAGCTCGGGCTCCTCTCTGCCCGTTG 71508541 Query 77636 GATAAGCAACAGCCGTCAGTGTAGACCACCACGGCGTCACC 77676 | | |||| ||||| || ||||| |||||||| || ||||| Sbjct 71508540 GCTGAGCAGCAGCCATCGGTGTACACCACCACAGCATCACC 71508500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397427434961485