Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothobranchius_20furzeri_20[refseq_20GCF_5F001465895.1_202015-12-11] 5,897 sequences; 1,242,518,059 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq5 89.7 6e-13 >seq5 Length=70255127 Score = 89.7 bits (98), Expect = 6e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 32668 GAGCCTTGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATTTTCTTCA 32727 |||| |||||| || || ||||||| || | |||||||| || ||| | || |||| Sbjct 24093055 GAGCTCTGTGGTGGTACTTCGTCTCTAAGGGCGTTGAATATCTGGACACTGTGTTTTTCA 24092996 Query 32728 TAATGAGAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGT 32787 | | | || || || ||||| || | || |||||||| ||||| || | ||||||| Sbjct 24092995 TCCTCCGGAAAAAGTTCAACCAGGTCACGTTCTTGCACGTCTACCATCACTGCACCATGT 24092936 Query 32788 TTACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACAG 32831 | || | | ||||| || || || ||| | |||||||||||| Sbjct 24092935 TCACGCTCTGGTGGATCGGCATCAAGTGGGTGGCAGGAGGACAG 24092892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603136338035280