Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothobranchius_20furzeri_20[refseq_20GCF_5F001465895.1_202015-12-11] 5,897 sequences; 1,242,518,059 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq11 140 2e-28 >seq11 Length=48234189 Score = 140 bits (154), Expect = 2e-28 Identities = 174/236 (74%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || ||||| | || || ||||| || ||| |||||| || |||||||| || Sbjct 21620117 CATTCCACCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTC 21620176 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| ||| | || || |||||||| || |||||||||| | ||||||||||| Sbjct 21620177 TGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGG 21620236 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | |||||||| ||| ||||| |||| | ||| | |||||||| | | Sbjct 21620237 GGGGATGCCTTCCTTGTCCTGGATCTT-AGCTTTGACATTCTCAATGGTGTCACTTGGCT 21620295 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 | ||||||| || || |||||||| || |||||||| || ||||| ||||||||| Sbjct 21620296 CGACCTCCAGGGTGATGGTCTTTCCAGTAAGGGTCTTGACAAAGATCTGCATGATG 21620351 Score = 134 bits (148), Expect = 1e-26 Identities = 171/233 (73%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || ||||| | || || ||||| || ||| |||||| || |||||||| || Sbjct 37620302 CATTCCACCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTC 37620361 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| ||| | || || |||||||| || |||||||||| | ||||||||||| Sbjct 37620362 TGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGG 37620421 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | |||||||| ||| ||||| |||| | ||| | |||||||| | | Sbjct 37620422 GGGGATGCCTTCCTTGTCCTGGATCTT-AGCTTTGACATTCTCAATGGTGTCACTTGGCT 37620480 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | ||||||| || || ||||| || ||||||||||| || ||||| |||||| Sbjct 37620481 CGACCTCCAGGGTGATGGTCTTACCAGTGAGGGTCTTGACAAAGATCTGCATG 37620533 Score = 134 bits (148), Expect = 1e-26 Identities = 171/233 (73%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||| || | || || ||||| || ||| |||||| ||||||||||| || Sbjct 37620530 CATGCCACCTCTAAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 37620589 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| ||| | || |||||||| || || |||||||||| | |||||| || | Sbjct 37620590 TGAGAGGGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGG 37620649 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 ||| | |||||||| ||| ||||| |||| | |||| | |||||||| | | Sbjct 37620650 AGGGATGCCTTCCTTGTCCTGGATCTT-GGCTTTCACGTTCTCGATGGTGTCACTTGGCT 37620708 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | ||||||| || || ||||| || ||||||||||| || ||||| |||||| Sbjct 37620709 CAACCTCCAGGGTGATGGTCTTACCAGTGAGGGTCTTGACAAAGATCTGCATG 37620761 Score = 129 bits (142), Expect = 4e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || ||||| | || || ||||| || ||| |||||| || |||||||| || | | Sbjct 21619893 CCACCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCTGAG 21619952 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| | || || |||||||| || |||||||||| | ||||||||||| || Sbjct 21619953 AGGGTGCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGGGGG 21620012 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCAC 44289 | |||||||| ||| ||||| |||| | ||| | |||||||| | || || Sbjct 21620013 ATGCCTTCCTTGTCCTGGATCTT-AGCTTTGACATTCTCAATGGTGTCACTTGGCTCGAC 21620071 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| || || |||||||| ||||||||||| || ||||| ||||| Sbjct 21620072 CTCCAGGGTGATGGTCTTTCCTGTGAGGGTCTTGACAAAGATCTGCAT 21620119 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 44110 TCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC 44169 ||| ||||| || | || || ||||| || ||| |||||| ||||||||||| || | Sbjct 37619880 TCCGCCTCTAAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGA 37619939 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 ||| || | || |||||||| || || |||||||||| | |||||| || | ||| Sbjct 37619940 GAGGGTACGGCCATCTTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGG 37619999 Query 44230 CACACCTTCCTTTTCCGTTATCTT 44253 | |||||||| ||| ||||| Sbjct 37620000 GATGCCTTCCTTGTCCTGGATCTT 37620023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359964527602449