Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oreochromis_20niloticus_20[refseq_20GCF_5F001858045.1_202016-11-21] 2,567 sequences; 1,009,856,516 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq6 127 2e-24 >seq6 Length=34628617 Score = 127 bits (140), Expect = 2e-24 Identities = 184/256 (72%), Gaps = 8/256 (3%) Strand=Plus/Minus Query 83143 GAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTG 83202 |||||||||||||||||||| ||||||||| | |||||| || |||| || |||| Sbjct 16441671 GAACTTCTCGAAGTTCCAGGACACGTCGTTCCTGCACACCGGGCTCCAGTTGATCAGCTT 16441612 Query 83203 GGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGT--AGG 83260 |||||| ||| || | | ||||||||| || | || || | | || | ||| Sbjct 16441611 GGGGTCAGTCATCAGGGATGTTGCGTCGTCGCTGGGTGTTGGGAG--CTTTTCCTTCAGG 16441554 Query 83261 AAGGCGAAGAGCGGATGTGC--CCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAA 83318 || | || || || || || |||| | |||| || || |||||| |||||| || Sbjct 16441553 AACACAAACAGGGGGTGGGCGTCCTTCC--CGTTCACTTCAACCTTCTCAAAGAGCTGAA 16441496 Query 83319 AGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCAT 83378 | || |||||||||||||| ||||||||||| | |||||| || | | ||| || ||| Sbjct 16441495 ACTTGGGCTCGAAGCCGTTTCCAGGACGGACATACTTCAGCGACAGGAGGATTTCTTCAT 16441436 Query 83379 TCTGGGCGTTTTCCTG 83394 ||| | ||| ||||| Sbjct 16441435 TCTTGCAGTTCTCCTG 16441420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608777265232680