Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oreochromis_20niloticus_20[refseq_20GCF_5F001858045.1_202016-11-21] 2,567 sequences; 1,009,856,516 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq21 93.3 4e-14 >seq21 Length=37011614 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 16259 TCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTA 16318 |||||||| || || | |||||| || | ||||| || |||||||| || | || || Sbjct 18722850 TCGTCCCTGCTAATGAGCTCGTTGGAGTAGGTAAGGCCAGGCATTAGGCCCCTCTTCTTC 18722791 Query 16319 ATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCA 16378 | ||| | ||||| |||||||||||||| ||||| || ||||| || || ||||| || Sbjct 18722790 AGCCAGTAGATAGCAGCAAATGAACCAGAGAAGAAGATGCCTTCCACAGCTGCAAAAGCC 18722731 Query 16379 ACCAATCGCTCACC 16392 || | ||||| || Sbjct 18722730 ACAATCCGCTCCCC 18722717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462497159146200