Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oreochromis_20niloticus_20[refseq_20GCF_5F001858045.1_202016-11-21] 2,567 sequences; 1,009,856,516 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq10 84.2 2e-11 >seq10 Length=27519051 Score = 84.2 bits (92), Expect = 2e-11 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 20991 AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGG 21050 || || || | ||| || |||| || || || || | |||||||| ||||| || || Sbjct 14138113 AGTCCTGTAATGTGTGCAATCATGTAGGTAAGAAGTGAATAGCTGGCAATGTTGAAAGGC 14138172 Query 21051 ACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCC 21110 ||||| | ||||| || || || | |||||||||||| || |||||||| || | Sbjct 14138173 ACCCCTAATCCCATATCAGCTGAGCGCTGGTACAGCTGACACGACAGCTCGCCGTCGCAC 14138232 Query 21111 ACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGC 21166 || || ||||| || | |||| || || || || ||||||| | ||||| || Sbjct 14138233 ACATAGAACTGGCAGAGTGCGTGGCAGGGGGGCAGCGCCATCCTAGGAAGGTCTGC 14138288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427762616894160