Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oreochromis_20niloticus_20[refseq_20GCF_5F001858045.1_202016-11-21] 2,567 sequences; 1,009,856,516 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq1437 87.8 2e-12 >seq1437 Length=1065406 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 || ||||| | ||||| ||||| | ||||| || | || ||| | || || ||| | Sbjct 750019 AACATGCAGATCTTTGTGAAAACCCTCACTGGCAAGACCATCACCCTGGAGGTTGAGCCA 749960 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 | |||||||||||| | ||||| || || || || |||||||| || || || Sbjct 749959 AGTGACACCATCGAGAATGTCAAGGCCAAAATCCAGGATAAGGAAGGCATTCCCCCTGAC 749900 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 || ||||| ||||| | | |||||||| || ||||||| | | | | || ||| || Sbjct 749899 CAGCAGAGGCTGATATTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTAC 749840 Query 24168 AACATTCAAAAAGAATCTACAATTCA 24193 ||||| || || || || || |||| Sbjct 749839 AACATCCAGAAGGAGTCCACCCTTCA 749814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429922549317885