Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oreochromis_20niloticus_20[refseq_20GCF_5F001858045.1_202016-11-21] 2,567 sequences; 1,009,856,516 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq15 116 3e-21 >seq15 Length=39264731 Score = 116 bits (128), Expect = 3e-21 Identities = 192/271 (71%), Gaps = 7/271 (3%) Strand=Plus/Plus Query 129580 GGATAGTAGTTGATGTCTATAATTTTGTTTAAATTCTTGACCACAATTTTCGTTACGTAT 129639 || |||||||||||||| |||| ||||| || ||| |||| | | ||| || |||||| Sbjct 17055216 GGGTAGTAGTTGATGTCGATAACCTTGTTCAAGTTCCTGACAATTACTTTGGTCACGTAT 17055275 Query 129640 TTTAACATTTCAAAATTGTAC-TCGCCTACATCGATGTCG-ACAAATTGATTGACACAAA 129697 | ||| ||| | || || || || | || || ||| || |||| | | Sbjct 17055276 GCCAGTTTTTTAAAGTCATAAGTCCGCT-CAGGGGTGACGTACA---TG-TTGAGAGCGA 17055330 Query 129698 TCGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGCGC 129757 | ||||||| ||||||||| || |||| ||| | |||||||||| ||||| | || Sbjct 17055331 TAGAGGCCAGATTGCAGACCGCCACCTCGTCCTTGCTAGTGTACTCGACGATTTCCGTGC 17055390 Query 129758 ACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGATTACTTTTCATGTTGCAAGCAT 129817 | | || || || |||||||||| || || || || || ||| ||||||| || | Sbjct 17055391 AAAGGTTGCTGCACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGT 17055450 Query 129818 CTTTGTACATCATGTACGGCGTGCCCGTTTC 129848 ||||||| | |||||||||||| || ||||| Sbjct 17055451 CTTTGTAGACCATGTACGGCGTCCCAGTTTC 17055481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419714868678355