Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oreochromis_20niloticus_20[refseq_20GCF_5F001858045.1_202016-11-21] 2,567 sequences; 1,009,856,516 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq1437 91.5 1e-13 >seq1437 Length=1065406 Score = 91.5 bits (100), Expect = 1e-13 Identities = 145/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || ||||| || || || || |||||||| || ||| | | | ||||| | || Sbjct 779123 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGC 779182 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 |||||||| | |||| | ||||||||| ||||| ||||||||||| |||||| Sbjct 779183 TTGCCAGCAAAGATCAGCCTCTGTTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATTTTG 779242 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || || || ||||| || || || | ||| ||||| || || || Sbjct 779243 GCCTTGACATTCTCAATGGTGTCGCTTGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTG 779302 Query 15154 AGAGTTTTTACAAAAATTTGCATATTTG 15181 || ||||| ||||| || ||||| |||| Sbjct 779303 AGGGTTTTCACAAAGATCTGCATGTTTG 779330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357380818879595