Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oreochromis_20niloticus_20[refseq_20GCF_5F001858045.1_202016-11-21] 2,567 sequences; 1,009,856,516 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq19 140 3e-28 >seq19 Length=31245232 Score = 140 bits (154), Expect = 3e-28 Identities = 134/172 (78%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 34315 AGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCA 34374 || ||||| || ||||||||||| || | ||||| |||||| || | |||||| |||||| Sbjct 24862702 AGATCAGTTTCAGGGTTGTCACACTCGGCACACAGCACAAATTTTCTGATGAACCCATCA 24862643 Query 34375 AGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTG 34434 |||| |||||| ||||| | |||||||| |||||||||||| | || ||||||||| Sbjct 24862642 AGCATGTCCTGCAACTTGTTCGCCTCGTGGGATCCGTTGACGATGTAACGATCGTTTTTG 24862583 Query 34435 TAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGT 34486 ||| | ||| || || ||||| || || || || || |||| ||||||| Sbjct 24862582 GTATCAAACTGGGTCTGAGCGCCGAGTTCACAACCAAAAAACTTGGTCGGGT 24862531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412828684121531