Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oreochromis_20niloticus_20[refseq_20GCF_5F001858045.1_202016-11-21] 2,567 sequences; 1,009,856,516 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq19 91.5 1e-13 >seq19 Length=31245232 Score = 91.5 bits (100), Expect = 1e-13 Identities = 125/172 (73%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCA 21184 ||||| ||||| || | || ||||| | || ||||||| ||| |||| ||||| Sbjct 7706587 AGCATCTGGGGCCCAACATGTGATGGTCTGGACCGCATTGTCGAGCAGTGTAGCCTGCCT 7706528 Query 21185 GAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAG- 21243 || | || |||||||||||| | | ||||| ||||||||||| |||| ||| ||| Sbjct 7706527 GACATGCAGGTGGGCGACTGGTTGGTGTTTGAGAACATGGGCGCCTACACAGTGG-CAGC 7706469 Query 21244 CTCTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTCA 21295 ||| || ||||| |||||||||| | || || | ||||| || || ||| Sbjct 7706468 CTCCTCCACCTTCAACGGCTTCCAGAGACCCGACATTCACTACGTCATGTCA 7706417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463530725980560