Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oreochromis_20niloticus_20[refseq_20GCF_5F001858045.1_202016-11-21] 2,567 sequences; 1,009,856,516 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1437 96.9 8e-15 >seq1437 Length=1065406 Score = 96.9 bits (106), Expect = 8e-15 Identities = 150/213 (70%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGA---AAGTTCT 206229 ||||| ||| ||||| ||||| || || || ||||| |||| || || |||| Sbjct 750013 CAGATCTTTGTGAAAACCCTCACTGGCAAGACCATCACCCTGGAGGTTGAGCCAAGT--- 749957 Query 206230 GACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCT 206289 ||||| |||| || ||| || || || || || ||||| ||| || ||| Sbjct 749956 GACACCATCGAGAATGTCAAGGCCAAAATCCAGGATAAGGAAGGCATTCCCCCTGACCAG 749897 Query 206290 CAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAAC 206349 || || || || || || || |||||| |||||||||| | || | |||| |||||| Sbjct 749896 CAGAGGCTGATATTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAAC 749837 Query 206350 GTCCAGAAAGAGTCTACTCTTCACCTTGTTTTG 206382 ||||||| ||||| || |||||||||||| || Sbjct 749836 ATCCAGAAGGAGTCCACCCTTCACCTTGTTCTG 749804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181781930283207