Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oreochromis_20niloticus_20[refseq_20GCF_5F001858045.1_202016-11-21] 2,567 sequences; 1,009,856,516 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq10 131 2e-25 >seq10 Length=27519051 Score = 131 bits (144), Expect = 2e-25 Identities = 128/165 (78%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| || || || | ||| || | ||||||||| || || || |||||||| |||||||| Sbjct 14138109 CTTGAGTCCTGTAATGTGTGCAATCATGTAGGTAAGAAGTGAATAGCTGGCAATGTTGAA 14138168 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 || ||||| | ||||| || | || | |||||||||||| ||||| ||||| ||||| Sbjct 14138169 AGGCACCCCTAATCCCATATCAGCTGAGCGCTGGTACAGCTGACACGACAGCTCGCCGTC 14138228 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 | ||| || |||||||| || |||||| || ||||||||||| Sbjct 14138229 GCACACATAGAACTGGCAGAGTGCGTGGCAGGGGGGCAGCGCCAT 14138273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583469277328800