Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oreochromis_20niloticus_20[refseq_20GCF_5F001858045.1_202016-11-21] 2,567 sequences; 1,009,856,516 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq10 82.4 6e-11 >seq10 Length=27519051 Score = 82.4 bits (90), Expect = 6e-11 Identities = 114/160 (71%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837 || || ||||||||||||||||| || || || || || |||||||| || ||||| Sbjct 14138116 CCTGTAATGTGTGCAATCATGTAGGTAAGAAGTGAATAGCTGGCAATGTTGAAAGGCACC 14138175 Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACA 111897 |||| |||||||| | || | || || |||||||| || || | | ||||| Sbjct 14138176 CCTAATCCCATATCAGCTGAGCGCTGGTACAGCTGACACGACAGCTCGCCGTCGCACACA 14138235 Query 111898 TAAAATTGACAAAGTACATGACAAGGAGGCAATGCCATCC 111937 || || || || ||| | || || || |||| ||||||| Sbjct 14138236 TAGAACTGGCAGAGTGCGTGGCAGGGGGGCAGCGCCATCC 14138275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391933337859421