Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oreochromis_20niloticus_20[refseq_20GCF_5F001858045.1_202016-11-21] 2,567 sequences; 1,009,856,516 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq10 84.2 8e-12 >seq10 Length=27519051 Score = 84.2 bits (92), Expect = 8e-12 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 52110 ATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAAGGTAAGCTTTCG 52169 |||||| || | |||||||| |||| | ||| |||||||| || || |||| ||| Sbjct 14138273 ATGGCGCTGCCCCCCTGCCACGCACTCTGCCAGTTCTATGTGTGCGACGGCGAGCTGTCG 14138214 Query 52170 TGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAGC 52229 || || |||| ||||| || || || ||| || || || || || |||||||||||| Sbjct 14138213 TGTCAGCTGTACCAGCGCTCAGCTGATATGGGATTAGGGGTGCCTTTCAACATTGCCAGC 14138154 Query 52230 TATTCCTTGCTGACGCATCTGATTGC 52255 ||||| | || || | ||||||| Sbjct 14138153 TATTCACTTCTTACCTACATGATTGC 14138128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190090205279870