Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03] 298,139 sequences; 350,448,509 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq178749 93.3 4e-14 seq171131 87.8 2e-12 >seq178749 Length=757 Score = 93.3 bits (102), Expect = 4e-14 Identities = 86/109 (79%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045 |||||||||||||||| || ||||| || || |||| ||||||||| |||| |||| Sbjct 308 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGTCCGGGCATCAGGCCTCTCTTCT 367 Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGAC 17094 | | ||| || || |||||||| || ||||| ||||| || ||||| || Sbjct 368 TCAGCCAGAAGATGGCGGCGAAGGAACCAGAGAAGAAGATCCCCTCCAC 416 >seq171131 Length=971 Score = 87.8 bits (96), Expect = 2e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 17237 TACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAAT 17296 || || |||||||| ||||||||||| || ||||| |||||||||||||| ||||| || Sbjct 971 TAGGTGTCGATGAGCAGGCTGTACATCTCTGAGTGGATGTTCTCCATGGCGATCTGGAAA 912 Query 17297 CCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCC 17332 || || || |||| ||| |||| | || |||||| Sbjct 911 CCATAGAAACATCTGGCCTCCGTCACCTGCACTTCC 876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515616843404520