Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03]
298,139 sequences; 350,448,509 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq285305 96.9 3e-15
>seq285305
Length=1559
Score = 96.9 bits (106), Expect = 3e-15
Identities = 229/344 (67%), Gaps = 3/344 (1%)
Strand=Plus/Minus
Query 133617 AACGCGTCGGCCAAACCCTGTATGCCGACGCCGATGGGTCGATGTTTTTTATTGCTCCTC 133676
|| ||||| ||||| || || | |||| ||||| || | || || ||| | ||
Sbjct 1357 AAGGCGTCCGCCAATCCTTGGACACCGATCCCGATCGGCCTGTGACGCTTGTTGGACTTC 1298
Query 133677 TCCGACTCGGCCGTGGGATAGTGGTTGACGTCGATGATCTTGTTGAGATTGCGGACGATA 133736
|| | |||| | || ||| ||||| ||||||||||||||| || || | || ||
Sbjct 1297 TCAGCTTCGGGCACTGGGTAGAAGTTGATGTCGATGATCTTGTTCAGGTTTCTCACAATT 1238
Query 133737 ATTTTAGTCAAATGTTTCAGCAAAACATAGTCAAATGTCTTGGCGTCGACGTCGACGCAC 133796
| ||| |||| || ||| | ||||||| ||| || | || |||| ||
Sbjct 1237 ACTTTGGTCACTTGGGCCAGTTTTTTAAAGTCAAAAGTCC--GCTCAGGGGT-GACGTAC 1181
Query 133797 TTGTTGACGGCAATACTGGCTAGATTACAAACGGCCGTCTCGTTCTCGTCGCAATACTGG 133856
|||||| || || || |||||||| || ||| ||| | || | | || |
Sbjct 1180 ATGTTGAGAGCGATGGACGCCAGATTACAGACCGCCACCTCATCCTGGCTGGTGTATTCA 1121
Query 133857 ACGATCTCGGCGCAGAGGTTGCTGCATTTGATGGTGCCCAAAtttttttGATTGCTAAAG 133916
|| ||||| | |||||| || ||||||||||||||||| | ||| | || |||||
Sbjct 1120 ACTATCTCTGTGCAGAGATTACTGCATTTGATGGTGCCGAGATTCTGCTGGTTGCTCTTC 1061
Query 133917 TTATTGCAATGATCCTTGTATAGCATGTACGGCCCGCCGGTTTC 133960
| ||||| || ||||| ||||||||||| ||||||||
Sbjct 1060 CTGTTGCAGGCGTCTTTGTAGAGCATGTACGGTGTACCGGTTTC 1017
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 432254047280188
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |