Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03] 298,139 sequences; 350,448,509 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq285305 96.9 3e-15 >seq285305 Length=1559 Score = 96.9 bits (106), Expect = 3e-15 Identities = 229/344 (67%), Gaps = 3/344 (1%) Strand=Plus/Minus Query 133617 AACGCGTCGGCCAAACCCTGTATGCCGACGCCGATGGGTCGATGTTTTTTATTGCTCCTC 133676 || ||||| ||||| || || | |||| ||||| || | || || ||| | || Sbjct 1357 AAGGCGTCCGCCAATCCTTGGACACCGATCCCGATCGGCCTGTGACGCTTGTTGGACTTC 1298 Query 133677 TCCGACTCGGCCGTGGGATAGTGGTTGACGTCGATGATCTTGTTGAGATTGCGGACGATA 133736 || | |||| | || ||| ||||| ||||||||||||||| || || | || || Sbjct 1297 TCAGCTTCGGGCACTGGGTAGAAGTTGATGTCGATGATCTTGTTCAGGTTTCTCACAATT 1238 Query 133737 ATTTTAGTCAAATGTTTCAGCAAAACATAGTCAAATGTCTTGGCGTCGACGTCGACGCAC 133796 | ||| |||| || ||| | ||||||| ||| || | || |||| || Sbjct 1237 ACTTTGGTCACTTGGGCCAGTTTTTTAAAGTCAAAAGTCC--GCTCAGGGGT-GACGTAC 1181 Query 133797 TTGTTGACGGCAATACTGGCTAGATTACAAACGGCCGTCTCGTTCTCGTCGCAATACTGG 133856 |||||| || || || |||||||| || ||| ||| | || | | || | Sbjct 1180 ATGTTGAGAGCGATGGACGCCAGATTACAGACCGCCACCTCATCCTGGCTGGTGTATTCA 1121 Query 133857 ACGATCTCGGCGCAGAGGTTGCTGCATTTGATGGTGCCCAAAtttttttGATTGCTAAAG 133916 || ||||| | |||||| || ||||||||||||||||| | ||| | || ||||| Sbjct 1120 ACTATCTCTGTGCAGAGATTACTGCATTTGATGGTGCCGAGATTCTGCTGGTTGCTCTTC 1061 Query 133917 TTATTGCAATGATCCTTGTATAGCATGTACGGCCCGCCGGTTTC 133960 | ||||| || ||||| ||||||||||| |||||||| Sbjct 1060 CTGTTGCAGGCGTCTTTGTAGAGCATGTACGGTGTACCGGTTTC 1017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432254047280188