Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03]
298,139 sequences; 350,448,509 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq40391 96.9 4e-15
seq129789 89.7 6e-13
seq169311 84.2 2e-11
seq6079 84.2 2e-11
seq282681 82.4 9e-11
seq68397 82.4 9e-11
>seq40391
Length=220
Score = 96.9 bits (106), Expect = 4e-15
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||| |||||||||||||||||||||| ||||||
Sbjct 116 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGACATACTGTCCACTA 57
Query 60126 TACTACCGAGGAT 60138
||||| |||||||
Sbjct 56 TACTAACGAGGAT 44
>seq129789
Length=334
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121
|||||||| || | ||||||||||||| ||||| |||||||||||||||| ||||| ||
Sbjct 263 TTTTCTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCC 322
Query 60122 ACTATACTACCG 60133
||||||||| ||
Sbjct 323 ACTATACTAACG 334
>seq169311
Length=2236
Score = 84.2 bits (92), Expect = 2e-11
Identities = 60/69 (87%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | ||||||||||||| ||||| |||||||||||||||| ||||| |||||
Sbjct 2168 TCTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACT 2227
Query 60125 ATACTACCG 60133
|||||| ||
Sbjct 2228 ATACTAACG 2236
>seq6079
Length=529
Score = 84.2 bits (92), Expect = 2e-11
Identities = 60/69 (87%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | ||||||||||||| ||||| |||||||||||||||| ||||| |||||
Sbjct 341 TCTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACT 400
Query 60125 ATACTACCG 60133
|||||| ||
Sbjct 401 ATACTAACG 409
>seq282681
Length=1450
Score = 82.4 bits (90), Expect = 9e-11
Identities = 59/68 (87%), Gaps = 0/68 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||| |||||||||||||||| ||||| ||||||
Sbjct 804 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 863
Query 60126 TACTACCG 60133
||||| ||
Sbjct 864 TACTAACG 871
>seq68397
Length=4143
Score = 82.4 bits (90), Expect = 9e-11
Identities = 59/68 (87%), Gaps = 0/68 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||| |||||||||||||||| ||||| ||||||
Sbjct 4076 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 4135
Query 60126 TACTACCG 60133
||||| ||
Sbjct 4136 TACTAACG 4143
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 569686585906920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |