Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03] 298,139 sequences; 350,448,509 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq281626 156 3e-33 >seq281626 Length=2328 Score = 156 bits (172), Expect = 3e-33 Identities = 165/215 (77%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 91819 CAAAGAGGACTACAACATCATCATGGACACTGTCAGACAA-CTGGAACAAAGTGGCTTCT 91877 ||| ||||||| | ||||||| |||||| | || || || |||| || |||||| Sbjct 940 CAAGGAGGACTGTGAGATCATCACGGACACAG-CATCTAAGCTTGAACGCAGCAGCTTCT 998 Query 91878 ACTGGGGTCCTTTGGGGGTCGAGGAGGCACATCGTATGCTGCGCAACTCGGCACTGGGCA 91937 | ||||| ||| |||| || ||||| ||||| || |||||||| || | | || |||| Sbjct 999 ATTGGGGCCCTCTGGGAGTAGAGGACGCACACCGCATGCTGCGGGACGCTCCGCTTGGCA 1058 Query 91938 GCTTTCTCATTCGGGATAGCAGGCAAAAGGACGTCTTGTTCACGCTGTCGTATCACTCTG 91997 ||||||||||||| || ||||| || || |||||||| |||||| |||| |||||| | Sbjct 1059 GCTTTCTCATTCGCGACAGCAGACAGAAAGACGTCTTCTTCACGTTGTCCTATCACGCCA 1118 Query 91998 TGACCGGACCCGTCAGTGTGAGGATTGAATACAAG 92032 || |||||| ||||||||| | || || |||||| Sbjct 1119 AGAGCGGACCGGTCAGTGTGCGCATCGACTACAAG 1153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354939200612017